About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_027149-T1HEPARANASE
LLU|FUN_027150-T1HEPARANASE
LLU|FUN_027151-T1
LLU|FUN_027152-T1TOLL-LIKE RECEPTOR
LLU|FUN_027153-T1TOLL-LIKE RECEPTOR
LLU|FUN_027154-T1AGAP008170-PA
LLU|FUN_027155-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_027156-T1
LLU|FUN_027157-T1
LLU|FUN_027158-T1COLORECTAL MUTANT CANCER PROTEIN MCC PROTEIN -RELATED
LLU|FUN_027159-T1OS10G0105400 PROTEIN
LLU|FUN_027160-T1OS10G0105400 PROTEIN
LLU|FUN_027161-T1PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
LLU|FUN_027162-T1
LLU|FUN_027163-T1UPF0428 PROTEIN CXORF56
LLU|FUN_027164-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_027165-T1MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL
LLU|FUN_027166-T1
LLU|FUN_027167-T1IG-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_027168-T1HISTONE ACETYLTRANSFERASE
LLU|FUN_027169-T1HEAT SHOCK PROTEIN 70KDA
LLU|FUN_027170-T1E3 UBIQUITIN-PROTEIN LIGASE RNF26
LLU|FUN_027171-T1
LLU|FUN_027172-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
LLU|FUN_027173-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
LLU|FUN_027174-T1UNCHARACTERIZED
LLU|FUN_027175-T1DIVALENT CATION TOLERANCE CUTA-RELATED
LLU|FUN_027176-T1
LLU|FUN_027177-T1HYDROXYLAMINE REDUCTASE
LLU|FUN_027178-T1
LLU|FUN_027179-T1
LLU|FUN_027180-T1MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
LLU|FUN_027181-T1
LLU|FUN_027182-T1
LLU|FUN_027183-T1
LLU|FUN_027184-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
LLU|FUN_027185-T1
LLU|FUN_027186-T1
LLU|FUN_027187-T1TIMEOUT/TIMELESS-2
LLU|FUN_027188-T1
LLU|FUN_027189-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_027190-T1
LLU|FUN_027191-T1
LLU|FUN_027192-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
LLU|FUN_027193-T1SERINE/THREONINE PROTEIN KINASE
LLU|FUN_027194-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
LLU|FUN_027195-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_027196-T1
LLU|FUN_027197-T1
LLU|FUN_027198-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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