About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g12158N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE
Clavulariidae_g12159N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE
Clavulariidae_g1216
Clavulariidae_g12160N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE
Clavulariidae_g12161N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE
Clavulariidae_g12162PROTEASE M1 ZINC METALLOPROTEASE
Clavulariidae_g12163BCS1 AAA-TYPE ATPASE
Clavulariidae_g12164MYOTROPHIN
Clavulariidae_g12165ADDITIONAL SEX COMBS LIKE PROTEIN ASXL
Clavulariidae_g12166REGULATOR OF G-PROTEIN SIGNALING 22
Clavulariidae_g12167ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL
Clavulariidae_g12168STATHMIN
Clavulariidae_g12169
Clavulariidae_g1217TYROSINE-PROTEIN KINASE RECEPTOR
Clavulariidae_g12170SERINE/THREONINE-PROTEIN KINASE RIO1
Clavulariidae_g12171
Clavulariidae_g12172
Clavulariidae_g12173MULTI-COPPER OXIDASE
Clavulariidae_g12174MULTI-COPPER OXIDASE
Clavulariidae_g12175EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1
Clavulariidae_g12176GREB1-RELATED
Clavulariidae_g12177
Clavulariidae_g12178NEURENSIN 1-RELATED
Clavulariidae_g12179ELONGIN-C
Clavulariidae_g1218
Clavulariidae_g12180SYNTENIN RELATED
Clavulariidae_g12181COMPLEMENT COMPONENT C6
Clavulariidae_g12182COMPLEMENT COMPONENT C6
Clavulariidae_g12183PEROXISOMAL MEMBRANE PROTEIN PEX13
Clavulariidae_g12184PROLACTIN REGULATORY ELEMENT BINDING PROTEIN
Clavulariidae_g12185CYTOSOLIC CARBOXYPEPTIDASE
Clavulariidae_g12186CYTOSOLIC CARBOXYPEPTIDASE
Clavulariidae_g12187GTP-BINDING PROTEIN-RELATED
Clavulariidae_g12188WD-REPEAT PROTEIN
Clavulariidae_g1218940S RIBOSOMAL PROTEIN S21
Clavulariidae_g1219PX DOMAIN-CONTAINING PROTEIN
Clavulariidae_g12190
Clavulariidae_g12191HISTONE ACETYLTRANSFERASE
Clavulariidae_g12192AEROLYSIN-LIKE PROTEIN-RELATED
Clavulariidae_g12193SODIUM/DICARBOXYLATE SYMPORTER-RELATED
Clavulariidae_g12194LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Clavulariidae_g12195SOLUTE CARRIER FAMILY 35 MEMBER B
Clavulariidae_g12196RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Clavulariidae_g12197
Clavulariidae_g12198INTELECTIN
Clavulariidae_g12199
Clavulariidae_g122PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g1220PROTEIN SIDEKICK
Clavulariidae_g12200
Clavulariidae_g12201PROTEIN G1-LIKE2
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