About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS22451MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
HS22452
HS22453BRYOPORIN
HS22454BRYOPORIN
HS22455RECEPTOR ACTIVITY MODIFYING PROTEIN RAMP
HS22456
HS22457ZINC FINGER PROTEIN
HS22458JNK1/MAPK8-ASSOCIATED MEMBRANE PROTEIN
HS22459DUF4605 DOMAIN-CONTAINING PROTEIN
HS22460REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS22461ABC1 FAMILY PROTEIN
HS22462UPSTREAM BINDING TRANSCRIPTION FACTOR
HS22463PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
HS22464T-BOX PROTEIN-RELATED
HS22465RING FINGER PROTEIN 17
HS22466
HS22467AMSH-LIKE PROTEASE
HS22468HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
HS22469RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
HS22470
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