About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS22201MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
HS22202B-BOX DOMAIN CONTAINING
HS22203B-BOX DOMAIN CONTAINING
HS22204SI:CH211-196P9.1-RELATED
HS22205MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
HS22206ERO1-RELATED
HS22207INTEGRAL MEMBRANE PROTEIN GPR137
HS22208VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
HS22209LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
HS22210
HS22211B-BOX DOMAIN CONTAINING
HS22212EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
HS22213B-BOX DOMAIN CONTAINING
HS22214OS02G0815200 PROTEIN
HS22215B-BOX DOMAIN CONTAINING
HS22216B-BOX DOMAIN CONTAINING
HS22217MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
HS22218B-BOX DOMAIN CONTAINING
HS22219MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
HS22220E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS22221E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS22222MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
HS22223B-BOX DOMAIN CONTAINING
HS22224B-BOX DOMAIN CONTAINING
HS22225MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
HS22226EPM2A-INTERACTING PROTEIN 1
HS22227B-BOX DOMAIN CONTAINING
HS22228E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS22229B-BOX DOMAIN CONTAINING
HS22230EPM2A-INTERACTING PROTEIN 1
HS22231E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS22232
HS22233B-BOX DOMAIN CONTAINING
HS22234B-BOX DOMAIN CONTAINING
HS22235EPM2A-INTERACTING PROTEIN 1
HS22236E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS22237BTB/POZ DOMAIN-CONTAINING
HS22238B-BOX DOMAIN CONTAINING
HS22239E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS22240E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS22241B-BOX DOMAIN CONTAINING
HS22242ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
HS22243B-BOX DOMAIN CONTAINING
HS22244B-BOX DOMAIN CONTAINING
HS22245E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS22246
HS22247B-BOX DOMAIN CONTAINING
HS22248
HS22249B-BOX DOMAIN CONTAINING
HS22250
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