About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS22301NUCLEAR RECEPTOR COACTIVATOR 4
HS22302KRAB AND ZINC FINGER DOMAIN-CONTAINING
HS22303WD-40 REPEAT PROTEIN
HS22304LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
HS22305REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS22306MALE-ENHANCED ANTIGEN-1
HS22307REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS22308ZINC FINGER CONTAINING PROTEIN
HS22309UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN
HS22310CULLIN AND GALACTOSE-BINDING DOMAIN-CONTAINING
HS22311NOTCH LIGAND FAMILY MEMBER
HS22312TAZ PROTEIN TAFAZZIN
HS22313UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE
HS22314LEUCINE-RICH REPEAT, ISOFORM F-RELATED
HS22315B-CELL LYMPHOMA/LEUKEMIA 11
HS22316INTERFERON/INTERLEUKIN RECEPTOR
HS22317INTERFERON/INTERLEUKIN RECEPTOR
HS22318INTERFERON/INTERLEUKIN RECEPTOR
HS22319UBX DOMAIN-CONTAINING PROTEIN 4
HS22320INTERFERON/INTERLEUKIN RECEPTOR
HS22321INTERFERON/INTERLEUKIN RECEPTOR
HS22322INTERFERON/INTERLEUKIN RECEPTOR
HS22323ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS22324SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B
HS22325IODOTHYRONINE DEIODINASE
HS22326CRUMBS FAMILY MEMBER
HS22327NOTCH LIGAND FAMILY MEMBER
HS22328TIGHT JUNCTION-ASSOCIATED PROTEIN 1
HS22329TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN
HS22330TRYPTOPHANYL-TRNA SYNTHETASE
HS22331MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
HS22332FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER
HS22333IQ DOMAIN-CONTAINING PROTEIN C
HS22334DOUBLECORTIN DOMAIN CONTAINING 2
HS22335TRANSMEMBRANE PROTEIN 234
HS22336NONCOMPACT MYELIN-ASSOCIATED PROTEIN
HS22337
HS22338PROBABLE MEMBRANE PROTEIN DUF221-RELATED
HS22339
HS22340RIBOSOME BINDING PROTEIN-1
HS22341RIBOSOME BINDING PROTEIN-1
HS22342PROTEIN PET117 HOMOLOG, MITOCHONDRIAL
HS22343
HS22344DOUBLE ZINC RIBBON AND ANKYRIN REPEAT-CONTAINING PROTEIN 1
HS22345DOUBLE ZINC RIBBON AND ANKYRIN REPEAT-CONTAINING PROTEIN 1
HS22346SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
HS22347SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
HS22348
HS22349WD-40 REPEAT PROTEIN
HS22350RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED
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