The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g6241 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| MBSQW58_g6242 | TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE |
| MBSQW58_g6243 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| MBSQW58_g6244 | PLAKOPHILLIN-RELATED |
| MBSQW58_g6245 | |
| MBSQW58_g6246 | D-DOPACHROME DECARBOXYLASE |
| MBSQW58_g6247 | UNCHARACTERIZED |
| MBSQW58_g6248 | TRAF-TYPE ZINC FINGER PROTEIN-RELATED |
| MBSQW58_g6249 | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10 |
| MBSQW58_g625 | |
| MBSQW58_g6250 | |
| MBSQW58_g6251 | DUF4291 DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g6252 | N-TERMINAL ACETYLTRANSFERASE-RELATED |
| MBSQW58_g6253 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
| MBSQW58_g6254 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| MBSQW58_g6255 | UNCHARACTERIZED |
| MBSQW58_g6256 | |
| MBSQW58_g6257 | |
| MBSQW58_g6258 | PROTEIN LIAT1 |
| MBSQW58_g6259 | |
| MBSQW58_g626 | ANKYRIN REPEAT AND EF-HAND DOMAIN-CONTAINING PROTEIN 1 |
| MBSQW58_g6260 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| MBSQW58_g6261 | |
| MBSQW58_g6262 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| MBSQW58_g6263 | |
| MBSQW58_g6264 | RIM BINDING PROTEIN-RELATED |
| MBSQW58_g6265 | |
| MBSQW58_g6266 | RIM BINDING PROTEIN-RELATED |
| MBSQW58_g6267 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 5 |
| MBSQW58_g6268 | |
| MBSQW58_g6269 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
| MBSQW58_g627 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| MBSQW58_g6270 | SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG |
| MBSQW58_g6271 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g6272 | |
| MBSQW58_g6273 | TERF1-INTERACTING NUCLEAR FACTOR 2 |
| MBSQW58_g6274 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
| MBSQW58_g6275 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| MBSQW58_g6276 | SPIRE |
| MBSQW58_g6277 | |
| MBSQW58_g6278 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
| MBSQW58_g6279 | |
| MBSQW58_g628 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| MBSQW58_g6280 | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN |
| MBSQW58_g6281 | PROTEIN C8ORF37 |
| MBSQW58_g6282 | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 |
| MBSQW58_g6283 | RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3 |
| MBSQW58_g6284 | CYCLINS |
| MBSQW58_g6285 | ZGC:162297 |
| MBSQW58_g6286 | ENOYL-COA HYDRATASE-RELATED |
