The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g6197 | CADHERIN-23 |
| MBSQW58_g6198 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 |
| MBSQW58_g6199 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| MBSQW58_g62 | |
| MBSQW58_g620 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g6200 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 |
| MBSQW58_g6201 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g6202 | |
| MBSQW58_g6203 | |
| MBSQW58_g6204 | |
| MBSQW58_g6205 | NG5 |
| MBSQW58_g6206 | ZINC FINGER PROTEIN |
| MBSQW58_g6207 | HL07962P-RELATED |
| MBSQW58_g6208 | GABA-B RECEPTOR |
| MBSQW58_g6209 | OS10G0105400 PROTEIN |
| MBSQW58_g621 | ATP-BINDING CASSETTE SUB-FAMILY C |
| MBSQW58_g6210 | |
| MBSQW58_g6211 | DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER |
| MBSQW58_g6212 | TRANSMEMBRANE PROTEIN KIAA1109 |
| MBSQW58_g6213 | METHYLTRANSFERASE LIKE 7B |
| MBSQW58_g6214 | |
| MBSQW58_g6215 | |
| MBSQW58_g6216 | LD36006P |
| MBSQW58_g6217 | |
| MBSQW58_g6218 | |
| MBSQW58_g6219 | |
| MBSQW58_g622 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| MBSQW58_g6220 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
| MBSQW58_g6221 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
| MBSQW58_g6222 | L-ASPARAGINASE |
| MBSQW58_g6223 | POU DOMAIN |
| MBSQW58_g6224 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| MBSQW58_g6225 | UNCHARACTERIZED |
| MBSQW58_g6226 | UNCHARACTERIZED |
| MBSQW58_g6227 | CBP/P300-RELATED |
| MBSQW58_g6228 | ADENYLATE CYCLASE TYPE 1 |
| MBSQW58_g6229 | ADENYLATE CYCLASE TYPE 1 |
| MBSQW58_g623 | |
| MBSQW58_g6230 | JNK/SAPK-ASSOCIATED PROTEIN |
| MBSQW58_g6231 | - |
| MBSQW58_g6232 | RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER |
| MBSQW58_g6233 | UBIQUITIN-CONJUGATING ENZYME E2 |
| MBSQW58_g6234 | |
| MBSQW58_g6235 | GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE |
| MBSQW58_g6236 | ATP7, ISOFORM B |
| MBSQW58_g6237 | |
| MBSQW58_g6238 | |
| MBSQW58_g6239 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| MBSQW58_g624 | |
| MBSQW58_g6240 | 30S/40S RIBOSOMAL PROTEIN S3 |
