The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g6061 | |
| MBSQW58_g6062 | |
| MBSQW58_g6063 | SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D |
| MBSQW58_g6064 | |
| MBSQW58_g6065 | HEME-BINDING MONOOXYGENASE FAMILY |
| MBSQW58_g6066 | CELL DIVISION PROTEIN KINASE |
| MBSQW58_g6067 | HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE |
| MBSQW58_g6068 | |
| MBSQW58_g6069 | |
| MBSQW58_g607 | GPI-ANCHORED PROTEIN P137 |
| MBSQW58_g6070 | GROWTH FACTOR RECEPTOR-BOUND PROTEIN |
| MBSQW58_g6071 | UNCHARACTERIZED |
| MBSQW58_g6072 | - |
| MBSQW58_g6073 | |
| MBSQW58_g6074 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| MBSQW58_g6075 | |
| MBSQW58_g6076 | |
| MBSQW58_g6077 | |
| MBSQW58_g6078 | |
| MBSQW58_g6079 | BARDET-BIEDL SYNDROME 1 PROTEIN |
| MBSQW58_g608 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 3A |
| MBSQW58_g6080 | |
| MBSQW58_g6081 | BARDET-BIEDL SYNDROME 1 PROTEIN |
| MBSQW58_g6082 | CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81 |
| MBSQW58_g6083 | |
| MBSQW58_g6084 | SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2 |
| MBSQW58_g6085 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
| MBSQW58_g6086 | 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL |
| MBSQW58_g6087 | RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG |
| MBSQW58_g6088 | |
| MBSQW58_g6089 | |
| MBSQW58_g609 | |
| MBSQW58_g6090 | INOSITOL POLYPHOSPHATE KINASE |
| MBSQW58_g6091 | PROTEIN, PUTATIVE-RELATED |
| MBSQW58_g6092 | E3 UBIQUITIN-PROTEIN LIGASE UBR7 |
| MBSQW58_g6093 | GLUTAMATE DEHYDROGENASE |
| MBSQW58_g6094 | |
| MBSQW58_g6095 | PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR |
| MBSQW58_g6096 | G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g6097 | SUGAR KINASE |
| MBSQW58_g6098 | CCAAT/ENHANCER BINDING PROTEIN |
| MBSQW58_g6099 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| MBSQW58_g61 | STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN |
| MBSQW58_g610 | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED |
| MBSQW58_g6100 | V-TYPE ATP SYNTHASE SUBUNIT D |
| MBSQW58_g6101 | |
| MBSQW58_g6102 | TUBULIN |
| MBSQW58_g6103 | TRANSMEMBRANE PROTEIN 72 |
| MBSQW58_g6104 | TUBULIN |
| MBSQW58_g6105 |
