The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g5837 | IL16-RELATED |
| MBSQW58_g5838 | |
| MBSQW58_g5839 | |
| MBSQW58_g584 | NUCLEOLAR PROTEIN OF 40 KDA |
| MBSQW58_g5840 | PRO-INTERLEUKIN-16 |
| MBSQW58_g5841 | |
| MBSQW58_g5842 | - |
| MBSQW58_g5843 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| MBSQW58_g5844 | TRANS-GOLGI PROTEIN GMX33 |
| MBSQW58_g5845 | HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE |
| MBSQW58_g5846 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 161 |
| MBSQW58_g5847 | SRCR DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g5848 | SRCR DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g5849 | DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED |
| MBSQW58_g585 | UNCHARACTERIZED |
| MBSQW58_g5850 | |
| MBSQW58_g5851 | NADH-UBIQUINONE OXIDOREDUCTASE MLRQ SUBUNIT |
| MBSQW58_g5852 | |
| MBSQW58_g5853 | RNA-BINDING PROTEIN RELATED |
| MBSQW58_g5854 | |
| MBSQW58_g5855 | OXYSTEROL-BINDING PROTEIN-RELATED |
| MBSQW58_g5856 | OXYSTEROL-BINDING PROTEIN-RELATED |
| MBSQW58_g5857 | WW DOMAIN-CONTAINING ADAPTER PROTEIN WITH COILED-COIL |
| MBSQW58_g5858 | |
| MBSQW58_g5859 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| MBSQW58_g586 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| MBSQW58_g5860 | DNA-DIRECTED RNA POLYMERASE |
| MBSQW58_g5861 | EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN |
| MBSQW58_g5862 | |
| MBSQW58_g5863 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B |
| MBSQW58_g5864 | |
| MBSQW58_g5865 | |
| MBSQW58_g5866 | ALANINE RACEMASE |
| MBSQW58_g5867 | SERINE PROTEASE INHIBITOR |
| MBSQW58_g5868 | REPLICATION PROTEIN A3 |
| MBSQW58_g5869 | |
| MBSQW58_g587 | |
| MBSQW58_g5870 | UNCHARACTERIZED PROTEIN YJBQ-RELATED |
| MBSQW58_g5871 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
| MBSQW58_g5872 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| MBSQW58_g5873 | |
| MBSQW58_g5874 | SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER |
| MBSQW58_g5875 | DUAL SPECIFICITY PROTEIN KINASE |
| MBSQW58_g5876 | DUAL SPECIFICITY PROTEIN KINASE |
| MBSQW58_g5877 | |
| MBSQW58_g5878 | SULFOTRANSFERASE SULT |
| MBSQW58_g5879 | |
| MBSQW58_g588 | |
| MBSQW58_g5880 | 60S RIBOSOMAL PROTEIN L38 |
| MBSQW58_g5881 | DOPAMINE BETA HYDROXYLASE RELATED |
