The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g6151 | |
| MBSQW58_g6152 | RAB9 EFFECTOR PROTEIN WITH KELCH MOTIFS |
| MBSQW58_g6153 | |
| MBSQW58_g6154 | E3 UBIQUITIN-PROTEIN LIGASE COP1 |
| MBSQW58_g6155 | DNA REPAIR PROTEIN XRCC2 |
| MBSQW58_g6156 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| MBSQW58_g6157 | |
| MBSQW58_g6158 | DIHYDROFOLATE REDUCTASE |
| MBSQW58_g6159 | |
| MBSQW58_g616 | |
| MBSQW58_g6160 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| MBSQW58_g6161 | ARMADILLO-TYPE FOLD-RELATED |
| MBSQW58_g6162 | AP COMPLEX SUBUNIT MU |
| MBSQW58_g6163 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| MBSQW58_g6164 | |
| MBSQW58_g6165 | |
| MBSQW58_g6166 | FOLLISTATIN-RELATED |
| MBSQW58_g6167 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| MBSQW58_g6168 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| MBSQW58_g6169 | RUN AND FYVE DOMAIN-CONTAINING PROTEIN 2-LIKE PROTEIN |
| MBSQW58_g617 | RETINOBLASTOMA-BINDING PROTEIN 6 |
| MBSQW58_g6170 | RUN AND FYVE DOMAIN-CONTAINING PROTEIN 2-LIKE PROTEIN |
| MBSQW58_g6171 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| MBSQW58_g6172 | |
| MBSQW58_g6173 | HISTONE H3 |
| MBSQW58_g6174 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| MBSQW58_g6175 | HISTONE H4 |
| MBSQW58_g6176 | |
| MBSQW58_g6177 | |
| MBSQW58_g6178 | |
| MBSQW58_g6179 | |
| MBSQW58_g618 | PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED |
| MBSQW58_g6180 | |
| MBSQW58_g6181 | |
| MBSQW58_g6182 | LD36006P |
| MBSQW58_g6183 | |
| MBSQW58_g6184 | |
| MBSQW58_g6185 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| MBSQW58_g6186 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
| MBSQW58_g6187 | GUANYLYL CYCLASE |
| MBSQW58_g6188 | |
| MBSQW58_g6189 | NEUROPEPTIDE Y RECEPTOR |
| MBSQW58_g619 | MODULATOR OF SMOOTHENED PROTEIN |
| MBSQW58_g6190 | - |
| MBSQW58_g6191 | |
| MBSQW58_g6192 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g6193 | PALMITOYLTRANSFERASE ZDHHC16 |
| MBSQW58_g6194 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| MBSQW58_g6195 | THYROTROPH EMBRYONIC FACTOR RELATED |
| MBSQW58_g6196 | DESMOGLEIN FAMILY MEMBER |
