About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s044.g0131.t1BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN
Lsat_s044.g0132.t1PROLYL-TRNA SYNTHETASE
Lsat_s044.g0133.t1GLUTAMINE-TRNA LIGASE
Lsat_s044.g0134.t1KELCH PROTEIN
Lsat_s044.g0135.t1KELCH PROTEIN
Lsat_s044.g0136.t1KELCH PROTEIN
Lsat_s044.g0137.t1UNCHARACTERIZED
Lsat_s044.g0138.t1GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1
Lsat_s044.g0139.t1GOLGI MEMBRANE PROTEIN YIP1
Lsat_s044.g0140.t1
Lsat_s044.g0141.t1FLAP ENDONUCLEASE FAMILY MEMBER
Lsat_s044.g0142.t1MED-6-RELATED
Lsat_s044.g0143.t1PROTEIN CBG12054-RELATED
Lsat_s044.g0144.t1
Lsat_s044.g0145.t1
Lsat_s044.g0146.t1
Lsat_s044.g0147.t1
Lsat_s044.g0148.t1
Lsat_s044.g0149.t1
Lsat_s044.g0150.t1
Lsat_s044.g0151.t1
Lsat_s044.g0152.t1FORKHEAD BOX PROTEIN G1
Lsat_s044.g0153.t1
Lsat_s044.g0154.t1
Lsat_s044.g0155.t1
Lsat_s044.g0156.t1NEPHROCYSTIN
Lsat_s044.g0157.t1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
Lsat_s044.g0158.t1
Lsat_s044.g0159.t15'->3' EXORIBONUCLEASE
Lsat_s044.g0160.t1PROTEIN CBG10425
Lsat_s044.g0161.t1PROTEIN CBG10425
Lsat_s044.g0162.t1
Lsat_s044.g0163.t1
Lsat_s044.g0164.t15'->3' EXORIBONUCLEASE
Lsat_s044.g0165.t1
Lsat_s044.g0166.t1
Lsat_s044.g0167.t1IMPORTIN BETA
Lsat_s044.g0168.t15'->3' EXORIBONUCLEASE
Lsat_s044.g0169.t1
Lsat_s044.g0170.t1HOMEOBOX PROTEIN NKX
Lsat_s044.g0171.t1
Lsat_s044.g0172.t1HOMEOBOX PROTEIN NKX
Lsat_s044.g0173.t1
Lsat_s044.g0174.t1
Lsat_s044.g0175.t1
Lsat_s044.g0176.t1HOMEOBOX PROTEIN NKX
Lsat_s044.g0177.t1COLLAGEN ALPHA
Lsat_s044.g0178.t1ZGC:174356
Lsat_s044.g0179.t1PROTEIN CBG10425
Lsat_s044.g0180.t1ZGC:174356
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