About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold5517.17174
mRNA.BJAM.scaffold5519.17175
mRNA.BJAM.scaffold5519.17176MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.scaffold5519.17177MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.scaffold5519.17178MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.scaffold5519.17179
mRNA.BJAM.scaffold552.3952CASEIN KINASE-RELATED
mRNA.BJAM.scaffold552.3953DIAMINE N-ACETYLTRANSFERASE
mRNA.BJAM.scaffold5521.17180
mRNA.BJAM.scaffold5521.17181
mRNA.BJAM.scaffold5521.17182
mRNA.BJAM.scaffold5521.17183TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT
mRNA.BJAM.scaffold5521.17184ZINC FINGER AND SCAN DOMAIN-CONTAINING
mRNA.BJAM.scaffold5521.17185MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS
mRNA.BJAM.scaffold5521.17186MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44
mRNA.BJAM.scaffold5521.17187UNCHARACTERIZED
mRNA.BJAM.scaffold5521.17188HEAT SHOCK PROTEIN 90 FAMILY MEMBER
mRNA.BJAM.scaffold5522.17190LD24308P
mRNA.BJAM.scaffold553.3955CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold553.3956EGF-LIKE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold553.3957
mRNA.BJAM.scaffold5530.17191
mRNA.BJAM.scaffold5530.17192
mRNA.BJAM.scaffold5531.17193RHO GUANINE EXCHANGE FACTOR-RELATED
mRNA.BJAM.scaffold5531.17194RHO GUANINE EXCHANGE FACTOR-RELATED
mRNA.BJAM.scaffold5535.17195SOLUTE CARRIER FAMILY 17
mRNA.BJAM.scaffold5537.17196
mRNA.BJAM.scaffold5539.17197
mRNA.BJAM.scaffold5539.17198
mRNA.BJAM.scaffold5539.17199FIBRILLIN-RELATED
mRNA.BJAM.scaffold5539.17200
mRNA.BJAM.scaffold5539.17201VALYL-TRNA SYNTHETASES
mRNA.BJAM.scaffold5539.17202CASEIN KINASE-RELATED
mRNA.BJAM.scaffold554.3958
mRNA.BJAM.scaffold554.3959
mRNA.BJAM.scaffold554.3960PROTEIN FOLDING REGULATOR
mRNA.BJAM.scaffold554.3961CEREBRAL PROTEIN-11-RELATED
mRNA.BJAM.scaffold554.3962CEREBRAL PROTEIN-11-RELATED
mRNA.BJAM.scaffold554.3963LYSOSOMAL ACID LIPASE-RELATED
mRNA.BJAM.scaffold554.3964SISTER CHROMATID COHESION PROTEIN DCC1-RELATED
mRNA.BJAM.scaffold554.3965
mRNA.BJAM.scaffold5540.17203CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED
mRNA.BJAM.scaffold5542.17204
mRNA.BJAM.scaffold5543.17205
mRNA.BJAM.scaffold5544.17206SEPTIN
mRNA.BJAM.scaffold5544.17208CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15
mRNA.BJAM.scaffold5545.17209
mRNA.BJAM.scaffold5546.172105'-NUCLEOTIDASE
mRNA.BJAM.scaffold5547.17211G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold5547.17212U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED
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