About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold5394.17023CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold5396.17024
mRNA.BJAM.scaffold5397.17025POLY [ADP-RIBOSE] POLYMERASE
mRNA.BJAM.scaffold5398.17026MSL2-RELATED
mRNA.BJAM.scaffold5398.17027HEAT SHOCK PROTEIN HSP-12.2-RELATED
mRNA.BJAM.scaffold5399.17028RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold5399.17029
mRNA.BJAM.scaffold54.410ZINC FINGER PROTEIN
mRNA.BJAM.scaffold54.411ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2
mRNA.BJAM.scaffold54.412ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2
mRNA.BJAM.scaffold54.413COLLAGEN ALPHA
mRNA.BJAM.scaffold54.414COLLAGEN ALPHA
mRNA.BJAM.scaffold54.415
mRNA.BJAM.scaffold54.416FIMBRIN/PLASTIN
mRNA.BJAM.scaffold54.417EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
mRNA.BJAM.scaffold54.418PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, MITOCHONDRIAL
mRNA.BJAM.scaffold54.419
mRNA.BJAM.scaffold54.420MAP/MICROTUBULE AFFINITY-REGULATING KINASE
mRNA.BJAM.scaffold54.421
mRNA.BJAM.scaffold54.422STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5
mRNA.BJAM.scaffold54.423
mRNA.BJAM.scaffold540.3868SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold5400.17030BRIDGING INTEGRATOR 3
mRNA.BJAM.scaffold5400.17031
mRNA.BJAM.scaffold5400.17032OS01G0750732 PROTEIN
mRNA.BJAM.scaffold5400.17033LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4
mRNA.BJAM.scaffold5401.17034
mRNA.BJAM.scaffold5402.17035-
mRNA.BJAM.scaffold5402.17036
mRNA.BJAM.scaffold5402.17037RNA LARIAT DEBRANCHING ENZYME
mRNA.BJAM.scaffold5402.17038PR DOMAIN ZINC FINGER PROTEIN
mRNA.BJAM.scaffold5402.17039CARBOXYLESTERASE
mRNA.BJAM.scaffold5403.17040
mRNA.BJAM.scaffold5403.17041ORGANIC ANION TRANSPORTER
mRNA.BJAM.scaffold5403.17042
mRNA.BJAM.scaffold5404.17043UNCHARACTERIZED
mRNA.BJAM.scaffold5406.17044DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT
mRNA.BJAM.scaffold5406.17045REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
mRNA.BJAM.scaffold5407.17046PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold5407.17047PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold5407.17048PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold5408.17049
mRNA.BJAM.scaffold541.3869
mRNA.BJAM.scaffold541.3870CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold5411.17050
mRNA.BJAM.scaffold5411.17051
mRNA.BJAM.scaffold5413.17052DEHYDROGENASES, SHORT CHAIN
mRNA.BJAM.scaffold542.3871
mRNA.BJAM.scaffold542.3872
mRNA.BJAM.scaffold542.3873BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
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