About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold5268.16843
mRNA.BJAM.scaffold5268.16844CHITINASE
mRNA.BJAM.scaffold5268.16845CHITINASE
mRNA.BJAM.scaffold5268.16846DIPEPTIDYL PEPTIDASE III-RELATED
mRNA.BJAM.scaffold527.3796INTRAFLAGELLAR TRANSPORT PROTEIN 122 FAMILY PROTEIN-RELATED
mRNA.BJAM.scaffold527.3797
mRNA.BJAM.scaffold527.3798DYNACTIN 6
mRNA.BJAM.scaffold527.3799EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
mRNA.BJAM.scaffold527.3800EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
mRNA.BJAM.scaffold527.3801EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
mRNA.BJAM.scaffold527.3802POLY A POLYMERASE CID PAP -RELATED
mRNA.BJAM.scaffold527.3803CONNECTOR ENCHANCER OF KINASE SUPPRESSOR OF RAS
mRNA.BJAM.scaffold527.3804
mRNA.BJAM.scaffold527.3805GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
mRNA.BJAM.scaffold527.3806
mRNA.BJAM.scaffold527.3807
mRNA.BJAM.scaffold5272.16847DNA POLYMERASE ETA
mRNA.BJAM.scaffold5274.16848
mRNA.BJAM.scaffold5275.16849ANKYRIN DOMAIN-CONTAINING
mRNA.BJAM.scaffold5279.16850CARBOHYDRATE SULFOTRANSFERASE
mRNA.BJAM.scaffold5279.16851CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
mRNA.BJAM.scaffold5279.16852
mRNA.BJAM.scaffold5279.16853
mRNA.BJAM.scaffold528.3808UNCHARACTERIZED
mRNA.BJAM.scaffold528.3809RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
mRNA.BJAM.scaffold528.3810UNCHARACTERIZED
mRNA.BJAM.scaffold528.3811UNCHARACTERIZED
mRNA.BJAM.scaffold528.3812
mRNA.BJAM.scaffold528.3813ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2
mRNA.BJAM.scaffold528.3814GLUCOSE-6-PHOSPHATASE
mRNA.BJAM.scaffold528.3815GLUCOSE-6-PHOSPHATASE
mRNA.BJAM.scaffold528.3816FAM98
mRNA.BJAM.scaffold528.3817XANTHINE DEHYDROGENASE
mRNA.BJAM.scaffold528.3818XANTHINE DEHYDROGENASE
mRNA.BJAM.scaffold528.3819XANTHINE DEHYDROGENASE
mRNA.BJAM.scaffold528.3820NONSENSE-MEDIATED MRNA DECAY PROTEIN 3
mRNA.BJAM.scaffold528.3821NONSENSE-MEDIATED MRNA DECAY PROTEIN 3
mRNA.BJAM.scaffold528.3822SPHINGOSINE KINASE
mRNA.BJAM.scaffold528.3823PROTEIN ARGININE N-METHYLTRANSFERASE 5
mRNA.BJAM.scaffold528.3824PROTEIN ARGININE N-METHYLTRANSFERASE 5
mRNA.BJAM.scaffold5281.16854
mRNA.BJAM.scaffold5281.16855UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED
mRNA.BJAM.scaffold5282.16856
mRNA.BJAM.scaffold5282.16857SODIUM/CHLORIDE DEPENDENT TRANSPORTER
mRNA.BJAM.scaffold5284.16858LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold5292.16859
mRNA.BJAM.scaffold5292.16860GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
mRNA.BJAM.scaffold5292.16861
mRNA.BJAM.scaffold5293.16862
mRNA.BJAM.scaffold5294.16863
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