About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold5217.16773
mRNA.BJAM.scaffold5218.16774BTB DOMAIN TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold5223.16775TRANSCRIPTION FACTOR MAF
mRNA.BJAM.scaffold5223.16776
mRNA.BJAM.scaffold5226.16777GUANYLYL CYCLASE
mRNA.BJAM.scaffold5226.16778LIPID PHOSPHATE PHOSPHATASE
mRNA.BJAM.scaffold5227.16779PR DOMAIN ZINC FINGER PROTEIN
mRNA.BJAM.scaffold5228.16780
mRNA.BJAM.scaffold5228.16781
mRNA.BJAM.scaffold523.3765
mRNA.BJAM.scaffold523.3766GLYCOGEN SYNTHASE KINASE-3 ALPHA
mRNA.BJAM.scaffold523.3767ANTERIOR GRADIENT PROTEIN-RELATED
mRNA.BJAM.scaffold523.3768CONTACTIN 5
mRNA.BJAM.scaffold523.3769PROTEIN SIDEKICK
mRNA.BJAM.scaffold5230.16782
mRNA.BJAM.scaffold5230.16783
mRNA.BJAM.scaffold5231.16784CASEIN KINASE-RELATED
mRNA.BJAM.scaffold5231.16785
mRNA.BJAM.scaffold5232.16786
mRNA.BJAM.scaffold5234.16787
mRNA.BJAM.scaffold5235.16788FRIZZLED
mRNA.BJAM.scaffold5235.16789FRIZZLED
mRNA.BJAM.scaffold5237.16790SODIUM/POTASSIUM/CALCIUM EXCHANGER
mRNA.BJAM.scaffold5237.16791
mRNA.BJAM.scaffold5237.16792SODIUM/POTASSIUM/CALCIUM EXCHANGER
mRNA.BJAM.scaffold5238.16793YEAST SPT2-RELATED
mRNA.BJAM.scaffold5238.16794
mRNA.BJAM.scaffold5238.16795CLEAVAGE STIMULATION FACTOR SUBUNIT 1
mRNA.BJAM.scaffold5239.16796UNCHARACTERIZED PROTEIN C1ORF50
mRNA.BJAM.scaffold5239.16797HISTIDYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold5239.16798HISTIDYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold5239.16799ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
mRNA.BJAM.scaffold5239.16800IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold5239.16801HISTIDYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold524.3770
mRNA.BJAM.scaffold524.3771
mRNA.BJAM.scaffold524.3772
mRNA.BJAM.scaffold524.3773
mRNA.BJAM.scaffold524.3774IONOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold524.3775
mRNA.BJAM.scaffold524.3776IONOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold524.3777ACROSIN-RELATED
mRNA.BJAM.scaffold524.3778ACROSIN-RELATED
mRNA.BJAM.scaffold524.3779PA14 DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold5240.16802ALPHA-GLUCOSIDASE
mRNA.BJAM.scaffold5240.16803ALPHA-GLUCOSIDASE
mRNA.BJAM.scaffold5240.16804
mRNA.BJAM.scaffold5240.168052-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED
mRNA.BJAM.scaffold5240.16806G-PROTEIN COUPLED RECEPTOR MTH-LIKE 1-RELATED
mRNA.BJAM.scaffold5240.16807
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