About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold513.3727
mRNA.BJAM.scaffold513.3728MICROTUBULE ASSOCIATED PROTEIN XMAP215
mRNA.BJAM.scaffold5130.16633FORKHEAD BOX PROTEIN
mRNA.BJAM.scaffold5130.16634FORKHEAD BOX PROTEIN
mRNA.BJAM.scaffold5130.16635ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN 26
mRNA.BJAM.scaffold5130.16636ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN 26
mRNA.BJAM.scaffold5131.16637
mRNA.BJAM.scaffold5131.16638
mRNA.BJAM.scaffold5131.16639TUBULIN
mRNA.BJAM.scaffold5133.16640
mRNA.BJAM.scaffold5135.16641WD REPEAT-CONTAINING PROTEIN 43
mRNA.BJAM.scaffold5135.16642SKELETOR-RELATED
mRNA.BJAM.scaffold5135.16643SKELETOR-RELATED
mRNA.BJAM.scaffold5135.16644SYNAPTIC ADHESION-LIKE MOLECULE SALM
mRNA.BJAM.scaffold5136.16645REQUIRED FOR EXCISION 1-B DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold5137.16646
mRNA.BJAM.scaffold5137.16647PNAS-3 RELATED
mRNA.BJAM.scaffold5137.16648
mRNA.BJAM.scaffold5140.16649PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold5140.16650
mRNA.BJAM.scaffold5140.16651PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold5140.16652TRYPSIN-RELATED
mRNA.BJAM.scaffold5140.16653
mRNA.BJAM.scaffold5140.16654TRYPSIN-RELATED
mRNA.BJAM.scaffold5140.16655CUTICLE PROTEIN
mRNA.BJAM.scaffold5140.16656CUTICLE PROTEIN
mRNA.BJAM.scaffold5140.16657CUTICLE PROTEIN
mRNA.BJAM.scaffold5140.16658
mRNA.BJAM.scaffold5140.16659
mRNA.BJAM.scaffold5140.16660CUTICLE PROTEIN
mRNA.BJAM.scaffold5140.16661CUTICLE PROTEIN
mRNA.BJAM.scaffold5141.16662STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold5141.16663STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold5141.16664STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold5141.16665STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold5143.16666-
mRNA.BJAM.scaffold5144.16667LIM/HOMEOBOX PROTEIN LHX
mRNA.BJAM.scaffold5144.16668LIM/HOMEOBOX PROTEIN LHX
mRNA.BJAM.scaffold5144.16669NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3
mRNA.BJAM.scaffold5144.16670
mRNA.BJAM.scaffold5146.16671
mRNA.BJAM.scaffold5146.16672DICER-RELATED
mRNA.BJAM.scaffold5147.16673
mRNA.BJAM.scaffold5147.16674
mRNA.BJAM.scaffold515.3729
mRNA.BJAM.scaffold515.3730DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold515.3731
mRNA.BJAM.scaffold5150.16675UBIQUITIN-ACTIVATING ENZYME E1
mRNA.BJAM.scaffold5151.16676
mRNA.BJAM.scaffold5152.16677SULFOTRANSFERASE SULT
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