About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold504.3649TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE
mRNA.BJAM.scaffold504.3650
mRNA.BJAM.scaffold504.3651TWINFILIN
mRNA.BJAM.scaffold504.3652
mRNA.BJAM.scaffold504.3653
mRNA.BJAM.scaffold504.3654NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL
mRNA.BJAM.scaffold504.3656
mRNA.BJAM.scaffold5040.16508CORTACTIN AND DREBRIN
mRNA.BJAM.scaffold5044.16509ANION EXCHANGE PROTEIN
mRNA.BJAM.scaffold5044.16510ANION EXCHANGE PROTEIN
mRNA.BJAM.scaffold5044.16511RING FINGER AND SRY DOMAIN-CONTAINING
mRNA.BJAM.scaffold5046.16512SERINE/THREONINE PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold5046.16513
mRNA.BJAM.scaffold5046.16514
mRNA.BJAM.scaffold5048.16515
mRNA.BJAM.scaffold5048.16516U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT
mRNA.BJAM.scaffold5048.16517
mRNA.BJAM.scaffold5048.16518
mRNA.BJAM.scaffold5048.16519MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
mRNA.BJAM.scaffold5049.16520G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
mRNA.BJAM.scaffold505.3657MITOCHONDRIAL RIBOSOMAL PROTEIN L37
mRNA.BJAM.scaffold505.3659CYTOCHROME P450
mRNA.BJAM.scaffold505.3661
mRNA.BJAM.scaffold505.3662HOMEOBOX PROTEIN
mRNA.BJAM.scaffold5050.16521TRANSLATION FACTOR
mRNA.BJAM.scaffold5050.16522WD REPEAT PROTEIN 26-RELATED
mRNA.BJAM.scaffold5050.16523WD REPEAT PROTEIN 26-RELATED
mRNA.BJAM.scaffold5051.16524PEFLIN
mRNA.BJAM.scaffold5051.16525
mRNA.BJAM.scaffold5051.1652660S RIBOSOMAL PROTEIN L4
mRNA.BJAM.scaffold5051.16527APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS
mRNA.BJAM.scaffold5052.16528MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
mRNA.BJAM.scaffold5052.16529PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
mRNA.BJAM.scaffold5053.16530
mRNA.BJAM.scaffold5053.16531
mRNA.BJAM.scaffold5053.16532ANOCTAMIN
mRNA.BJAM.scaffold5054.16533
mRNA.BJAM.scaffold5058.16534AMINO ACID TRANSPORTER
mRNA.BJAM.scaffold5058.16535NUCLEAR FRAGILE X MENTAL RETARDATION PROTEIN INTERACTING PROTEIN 1
mRNA.BJAM.scaffold5058.16536UNCHARACTERIZED
mRNA.BJAM.scaffold5059.16537UPF0041 BRAIN PROTEIN 44-RELATED
mRNA.BJAM.scaffold5059.16538
mRNA.BJAM.scaffold5059.16539
mRNA.BJAM.scaffold506.3663
mRNA.BJAM.scaffold506.3664
mRNA.BJAM.scaffold506.3665BESTROPHIN
mRNA.BJAM.scaffold506.3666UNCHARACTERIZED
mRNA.BJAM.scaffold506.3667
mRNA.BJAM.scaffold506.3668MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20-RELATED
mRNA.BJAM.scaffold506.3669
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