About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold506.3670
mRNA.BJAM.scaffold506.3671PRE-MRNA-SPLICING FACTOR CWF18
mRNA.BJAM.scaffold506.3672
mRNA.BJAM.scaffold506.3673
mRNA.BJAM.scaffold506.3674
mRNA.BJAM.scaffold506.3675
mRNA.BJAM.scaffold506.3676RE48511P
mRNA.BJAM.scaffold5062.16540DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
mRNA.BJAM.scaffold5062.16541GH17980P-RELATED
mRNA.BJAM.scaffold5062.16542DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
mRNA.BJAM.scaffold5062.16543GH17980P-RELATED
mRNA.BJAM.scaffold5063.16544
mRNA.BJAM.scaffold5063.16545DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED
mRNA.BJAM.scaffold5067.16546PROTEIN SIDEKICK
mRNA.BJAM.scaffold5067.16547CYTOKINE RECEPTOR
mRNA.BJAM.scaffold5067.16548INSULINOMA-ASSOCIATED 1
mRNA.BJAM.scaffold5068.16549
mRNA.BJAM.scaffold507.3677FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold507.3678FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold507.3679FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold507.3680FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold507.3681FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold507.3682FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold507.3683FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold507.3684FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold507.3685FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold507.3686FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold5070.16550TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT
mRNA.BJAM.scaffold5070.16551
mRNA.BJAM.scaffold5071.16552ETS
mRNA.BJAM.scaffold5071.16553
mRNA.BJAM.scaffold5071.16554ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBER
mRNA.BJAM.scaffold5071.16555
mRNA.BJAM.scaffold5071.16556TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
mRNA.BJAM.scaffold5071.16557SHORT-CHAIN DEHYDROGENASE/REDUCTASE
mRNA.BJAM.scaffold5072.16558UNCHARACTERIZED
mRNA.BJAM.scaffold5073.16559
mRNA.BJAM.scaffold5073.16560EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
mRNA.BJAM.scaffold5075.16561
mRNA.BJAM.scaffold5077.16562
mRNA.BJAM.scaffold5077.16563
mRNA.BJAM.scaffold5078.16564EH DOMAIN
mRNA.BJAM.scaffold5079.16565
mRNA.BJAM.scaffold5079.16566NCK-ASSOCIATED PROTEIN 1
mRNA.BJAM.scaffold5079.16567NCK-ASSOCIATED PROTEIN 1
mRNA.BJAM.scaffold5079.16568NCK-ASSOCIATED PROTEIN 1
mRNA.BJAM.scaffold5079.16569NCK-ASSOCIATED PROTEIN 1
mRNA.BJAM.scaffold5084.16570AMINO ACID TRANSPORTER
mRNA.BJAM.scaffold5084.16571N-ACETYLGLUCOSAMINYLTRANSFERASE VI
mRNA.BJAM.scaffold5084.16572N-ACETYLGLUCOSAMINYLTRANSFERASE VI
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