About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold5363.16979-
mRNA.BJAM.scaffold5368.16980LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold5368.16981
mRNA.BJAM.scaffold5368.16982
mRNA.BJAM.scaffold5369.16983POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
mRNA.BJAM.scaffold5369.16985POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
mRNA.BJAM.scaffold537.3860
mRNA.BJAM.scaffold5371.16986
mRNA.BJAM.scaffold5371.16987RIBOSOMAL PROTEIN S9
mRNA.BJAM.scaffold5371.16988ACROSIN-RELATED
mRNA.BJAM.scaffold5371.16989ACROSIN-RELATED
mRNA.BJAM.scaffold5371.16990RIBOSOMAL PROTEIN S6 KINASE
mRNA.BJAM.scaffold5373.16991BETA TRANSDUCIN-RELATED PROTEIN
mRNA.BJAM.scaffold5373.16992BETA TRANSDUCIN-RELATED PROTEIN
mRNA.BJAM.scaffold5373.16993BETA TRANSDUCIN-RELATED PROTEIN
mRNA.BJAM.scaffold5373.16994
mRNA.BJAM.scaffold5373.16995
mRNA.BJAM.scaffold5373.16996SMALL NUCLEAR RIBONUCLEOPROTEIN SM
mRNA.BJAM.scaffold5374.16997
mRNA.BJAM.scaffold5374.16998PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold5374.16999STABILIZER OF AXONEMAL MICROTUBULES 2
mRNA.BJAM.scaffold5374.17000STABILIZER OF AXONEMAL MICROTUBULES 2
mRNA.BJAM.scaffold5378.17001
mRNA.BJAM.scaffold5378.17002
mRNA.BJAM.scaffold5378.17003GUANYL-NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold5378.17004
mRNA.BJAM.scaffold5378.17005UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE
mRNA.BJAM.scaffold538.3861OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold538.3862TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold538.3863SIGNAL RECOGNITION PARTICLE 72
mRNA.BJAM.scaffold538.3864CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
mRNA.BJAM.scaffold538.3866LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
mRNA.BJAM.scaffold5380.17006METHYLTRANSFERASE-LIKE PROTEIN 24
mRNA.BJAM.scaffold5380.17007METHYLTRANSFERASE-LIKE PROTEIN 24
mRNA.BJAM.scaffold5380.17008SI:CH211-189E2.2
mRNA.BJAM.scaffold5383.17009ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 13B
mRNA.BJAM.scaffold5383.17010
mRNA.BJAM.scaffold5384.17011OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold5384.17012PROTEASOME SUBUNIT ALPHA/BETA
mRNA.BJAM.scaffold5385.17013
mRNA.BJAM.scaffold5385.17014
mRNA.BJAM.scaffold5385.17015
mRNA.BJAM.scaffold5385.17016SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
mRNA.BJAM.scaffold5385.17017
mRNA.BJAM.scaffold5386.17018G-PROTEIN COUPLED RECEPTOR 158-RELATED
mRNA.BJAM.scaffold5386.17019
mRNA.BJAM.scaffold5386.17020LIPASE
mRNA.BJAM.scaffold539.3867PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1
mRNA.BJAM.scaffold5390.17021CASEIN KINASE-RELATED
mRNA.BJAM.scaffold5392.17022KELCH DOMAIN-CONTAINING PROTEIN 10
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