About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold5589.17286DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER
mRNA.BJAM.scaffold559.3995
mRNA.BJAM.scaffold559.3996
mRNA.BJAM.scaffold5590.17287ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold5590.17288ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold5590.17289ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold5592.17290
mRNA.BJAM.scaffold5592.17291KINESIN-RELATED
mRNA.BJAM.scaffold5592.172923'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1
mRNA.BJAM.scaffold5592.17293
mRNA.BJAM.scaffold5594.17294
mRNA.BJAM.scaffold5594.17295
mRNA.BJAM.scaffold5594.17296CADHERIN-87A
mRNA.BJAM.scaffold5595.17297INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE
mRNA.BJAM.scaffold5595.17298
mRNA.BJAM.scaffold5595.17299WD REPEAT-CONTAINING PROTEIN POP1
mRNA.BJAM.scaffold5596.17300
mRNA.BJAM.scaffold5596.17301
mRNA.BJAM.scaffold5596.17302ADHESION G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold5597.17303ETS
mRNA.BJAM.scaffold5597.17304CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED
mRNA.BJAM.scaffold5598.17305
mRNA.BJAM.scaffold5598.17306DNA POLYMERASE SUBUNIT GAMMA-1
mRNA.BJAM.scaffold56.429
mRNA.BJAM.scaffold56.430EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED
mRNA.BJAM.scaffold560.3997
mRNA.BJAM.scaffold560.3998CADHERIN-23
mRNA.BJAM.scaffold560.3999
mRNA.BJAM.scaffold5600.17307
mRNA.BJAM.scaffold5600.17308
mRNA.BJAM.scaffold5600.17309
mRNA.BJAM.scaffold5604.17310
mRNA.BJAM.scaffold5607.17311SYNAPTOTAGMIN
mRNA.BJAM.scaffold561.4000
mRNA.BJAM.scaffold5610.17312
mRNA.BJAM.scaffold5610.17313OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold5610.17314OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold5610.17315OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold5611.17316
mRNA.BJAM.scaffold5612.17317RHO GUANINE EXCHANGE FACTOR-RELATED
mRNA.BJAM.scaffold5612.17318RHO GUANINE EXCHANGE FACTOR-RELATED
mRNA.BJAM.scaffold5614.17319
mRNA.BJAM.scaffold5616.17320RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
mRNA.BJAM.scaffold5616.17321
mRNA.BJAM.scaffold5616.17322
mRNA.BJAM.scaffold5617.17323
mRNA.BJAM.scaffold5617.17324FRINGE-RELATED
mRNA.BJAM.scaffold5618.17325ATP-DEPENDENT RNA HELICASE DBP3
mRNA.BJAM.scaffold5619.17326PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold562.4001TFIIF-ALPHA
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