About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold557.3973FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
mRNA.BJAM.scaffold557.3974GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1
mRNA.BJAM.scaffold557.3975GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1
mRNA.BJAM.scaffold557.3976GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1
mRNA.BJAM.scaffold557.3977PROTEIN DIAPHANOUS
mRNA.BJAM.scaffold557.3978
mRNA.BJAM.scaffold557.3979FTP DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold557.3980SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED
mRNA.BJAM.scaffold557.3981SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED
mRNA.BJAM.scaffold557.3982GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
mRNA.BJAM.scaffold557.3983NICOLIN 1
mRNA.BJAM.scaffold557.3984HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
mRNA.BJAM.scaffold557.3985
mRNA.BJAM.scaffold557.3986HOMEOBOX PROTEIN UNC-4 HOMOLOG
mRNA.BJAM.scaffold5571.17258
mRNA.BJAM.scaffold5571.17259
mRNA.BJAM.scaffold5572.17260INNER MEMBRANE TRANSPORTER YGJI-RELATED
mRNA.BJAM.scaffold5572.17261SUCCINYL-COA--D-CITRAMALATE COA-TRANSFERASE
mRNA.BJAM.scaffold5572.17262SUCCINYL-COA--D-CITRAMALATE COA-TRANSFERASE
mRNA.BJAM.scaffold5573.1726339S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED
mRNA.BJAM.scaffold5573.17264RIBOSOME RECYCLING FACTOR
mRNA.BJAM.scaffold5573.17265POLYCOMB GROUP PROTEIN
mRNA.BJAM.scaffold5573.17266
mRNA.BJAM.scaffold5573.17267
mRNA.BJAM.scaffold5573.17268
mRNA.BJAM.scaffold5574.17269PRESENILIN
mRNA.BJAM.scaffold5575.17270
mRNA.BJAM.scaffold5575.17271PROTEIN SIDEKICK
mRNA.BJAM.scaffold5575.17272
mRNA.BJAM.scaffold5576.17273
mRNA.BJAM.scaffold558.3987PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5A
mRNA.BJAM.scaffold558.3988
mRNA.BJAM.scaffold558.3989
mRNA.BJAM.scaffold558.3990FORKHEAD BOX PROTEIN
mRNA.BJAM.scaffold558.3991SULFATASE MODIFYING FACTOR 1, 2
mRNA.BJAM.scaffold558.3992SULFATASE MODIFYING FACTOR 1, 2
mRNA.BJAM.scaffold558.3993
mRNA.BJAM.scaffold558.3994EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM C
mRNA.BJAM.scaffold5580.17274METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE
mRNA.BJAM.scaffold5581.17275
mRNA.BJAM.scaffold5581.17276SOLUTE CARRIER FAMILY 35
mRNA.BJAM.scaffold5581.17277PDF RECEPTOR-LIKE PROTEIN-RELATED
mRNA.BJAM.scaffold5583.17278
mRNA.BJAM.scaffold5584.17279
mRNA.BJAM.scaffold5584.17280REGULATOR OF G-PROTEIN SIGNALING 3
mRNA.BJAM.scaffold5584.17281
mRNA.BJAM.scaffold5586.17282CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
mRNA.BJAM.scaffold5586.17283UNCHARACTERIZED
mRNA.BJAM.scaffold5586.17284
mRNA.BJAM.scaffold5587.17285
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