The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g2821 | ROLLING PEBBLES, ISOFORM B |
| MBSQW58_g2822 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g2823 | IONOTROPIC GLUTAMATE RECEPTOR |
| MBSQW58_g2824 | |
| MBSQW58_g2825 | COLLAGEN ALPHA |
| MBSQW58_g2826 | |
| MBSQW58_g2827 | COLLAGEN ALPHA |
| MBSQW58_g2828 | COLLAGEN ALPHA |
| MBSQW58_g2829 | |
| MBSQW58_g283 | TOLL-LIKE RECEPTOR |
| MBSQW58_g2830 | PROTEIN UNC-13 HOMOLOG |
| MBSQW58_g2831 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| MBSQW58_g2832 | DENN DOMAIN-CONTAINING PROTEIN 4 |
| MBSQW58_g2833 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g2834 | |
| MBSQW58_g2835 | CENTROSOMAL PROTEIN-RELATED |
| MBSQW58_g2836 | |
| MBSQW58_g2837 | PROTEIN SIDEKICK |
| MBSQW58_g2838 | TGF-BETA FAMILY |
| MBSQW58_g2839 | |
| MBSQW58_g284 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| MBSQW58_g2840 | 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE |
| MBSQW58_g2841 | C5ORF35 |
| MBSQW58_g2842 | CALCIUM BINDING PROTEIN |
| MBSQW58_g2843 | ZINC FINGER PROTEIN 142 |
| MBSQW58_g2844 | ZINC FINGER PROTEIN |
| MBSQW58_g2845 | ZINC FINGER PROTEIN |
| MBSQW58_g2846 | |
| MBSQW58_g2847 | TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 |
| MBSQW58_g2848 | |
| MBSQW58_g2849 | |
| MBSQW58_g285 | TRANSMEMBRANE CHANNEL-RELATED |
| MBSQW58_g2850 | 40S RIBOSOMAL PROTEIN S6 |
| MBSQW58_g2851 | TUMOR NECROSIS FACTOR INDUCED PROTEIN |
| MBSQW58_g2852 | |
| MBSQW58_g2853 | ZINC FINGER PROTEIN |
| MBSQW58_g2854 | FORKHEAD BOX PROTEIN |
| MBSQW58_g2855 | PROTEIN CBG12474 |
| MBSQW58_g2856 | FERROCHELATASE |
| MBSQW58_g2857 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| MBSQW58_g2858 | FTP DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g2859 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
| MBSQW58_g286 | CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED |
| MBSQW58_g2860 | PROTEIN FAM183B |
| MBSQW58_g2861 | RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED |
| MBSQW58_g2862 | NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT |
| MBSQW58_g2863 | FATTY ACID ACYL TRANSFERASE-RELATED |
| MBSQW58_g2864 | |
| MBSQW58_g2865 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| MBSQW58_g2866 | MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER |
