The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g2597 | SODIUM-BILE ACID COTRANSPORTER |
| MBSQW58_g2598 | SPERIOLIN |
| MBSQW58_g2599 | |
| MBSQW58_g26 | - |
| MBSQW58_g260 | F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED |
| MBSQW58_g2600 | N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE |
| MBSQW58_g2601 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY |
| MBSQW58_g2602 | |
| MBSQW58_g2603 | SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN |
| MBSQW58_g2604 | INTERLEUKIN ENHANCER-BINDING FACTOR |
| MBSQW58_g2605 | BNIP - RELATED |
| MBSQW58_g2606 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| MBSQW58_g2607 | |
| MBSQW58_g2608 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g2609 | ALPHA-MANNOSIDASE |
| MBSQW58_g261 | |
| MBSQW58_g2610 | |
| MBSQW58_g2611 | PROTEASE M1 ZINC METALLOPROTEASE |
| MBSQW58_g2612 | PROTEASE M1 ZINC METALLOPROTEASE |
| MBSQW58_g2613 | |
| MBSQW58_g2614 | |
| MBSQW58_g2615 | - |
| MBSQW58_g2616 | HISTIDINE TRIAD HIT PROTEIN |
| MBSQW58_g2617 | |
| MBSQW58_g2618 | CENTROSOMAL PROTEIN POC5 |
| MBSQW58_g2619 | |
| MBSQW58_g262 | EPM2A-INTERACTING PROTEIN 1 |
| MBSQW58_g2620 | UNCHARACTERIZED |
| MBSQW58_g2621 | ACID PHOSPHATASE-RELATED |
| MBSQW58_g2622 | |
| MBSQW58_g2623 | PROTEIN SIDEKICK |
| MBSQW58_g2624 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| MBSQW58_g2625 | PROTEIN CBG26694 |
| MBSQW58_g2626 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| MBSQW58_g2627 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| MBSQW58_g2628 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| MBSQW58_g2629 | PR DOMAIN ZINC FINGER PROTEIN |
| MBSQW58_g263 | SI:DKEY-32E6.3 |
| MBSQW58_g2630 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| MBSQW58_g2631 | ZINC FINGER PROTEIN |
| MBSQW58_g2632 | CCCH ZINGC FINGER |
| MBSQW58_g2633 | |
| MBSQW58_g2634 | TRANSCRIPTION FACTOR MAF |
| MBSQW58_g2635 | - |
| MBSQW58_g2636 | RETINOL DEHYDROGENASE |
| MBSQW58_g2637 | UBIQUITIN-CONJUGATING ENZYME E2 |
| MBSQW58_g2638 | |
| MBSQW58_g2639 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
| MBSQW58_g264 | DNA LIGASE |
| MBSQW58_g2640 | RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C |
