The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g2551 | |
| MBSQW58_g2552 | MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB |
| MBSQW58_g2553 | RUN AND SH3 DOMAIN CONTAINING |
| MBSQW58_g2554 | DI-N-ACETYLCHITOBIASE |
| MBSQW58_g2555 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
| MBSQW58_g2556 | MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS |
| MBSQW58_g2557 | TUDOR DOMAIN CONTAINING PROTEIN |
| MBSQW58_g2558 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM |
| MBSQW58_g2559 | MUTATED IN BLADDER CANCER 1 |
| MBSQW58_g256 | UNCHARACTERIZED |
| MBSQW58_g2560 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 |
| MBSQW58_g2561 | |
| MBSQW58_g2562 | ANTIGEN MLAA-22-RELATED |
| MBSQW58_g2563 | |
| MBSQW58_g2564 | |
| MBSQW58_g2565 | |
| MBSQW58_g2566 | FTP DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g2567 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| MBSQW58_g2568 | CREB/ATF BZIP TRANSCRIPTION FACTOR |
| MBSQW58_g2569 | SPERMATOGENESIS-ASSOCIATED PROTEIN 2/TAMOZHENNIC |
| MBSQW58_g257 | AMP-BINDING DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g2570 | DYNEIN REGULATORY COMPLEX SUBUNIT 4 |
| MBSQW58_g2571 | 4.1 G PROTEIN |
| MBSQW58_g2572 | |
| MBSQW58_g2573 | |
| MBSQW58_g2574 | 28S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL |
| MBSQW58_g2575 | INOSITOL MONOPHOSPHATASE |
| MBSQW58_g2576 | |
| MBSQW58_g2577 | EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN |
| MBSQW58_g2578 | PALMITOYLTRANSFERASE ZDHHC16 |
| MBSQW58_g2579 | D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH |
| MBSQW58_g258 | ACYL-COA SYNTHETASE |
| MBSQW58_g2580 | SET AND MYND DOMAIN-CONTAINING PROTEIN 5 |
| MBSQW58_g2581 | SET AND MYND DOMAIN-CONTAINING PROTEIN 5 |
| MBSQW58_g2582 | |
| MBSQW58_g2583 | |
| MBSQW58_g2584 | OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR |
| MBSQW58_g2585 | |
| MBSQW58_g2586 | BOLA-LIKE PROTEIN 3 |
| MBSQW58_g2587 | UNCHARACTERIZED |
| MBSQW58_g2588 | INTERFERON ALPHA-INDUCIBLE PROTEIN 27 |
| MBSQW58_g2589 | CALPAIN |
| MBSQW58_g259 | INNER MEMBRANE TRANSPORTER YGJI-RELATED |
| MBSQW58_g2590 | NULP1-RELATED |
| MBSQW58_g2591 | SODIUM-BILE ACID COTRANSPORTER |
| MBSQW58_g2592 | |
| MBSQW58_g2593 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| MBSQW58_g2594 | PROTEASOME SUBUNIT ALPHA/BETA |
| MBSQW58_g2595 | NUCLEAR TRANSPORT FACTOR 2 |
| MBSQW58_g2596 | SULFIDE:QUINONE OXIDOREDUCTASE |
