The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g2867 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| MBSQW58_g2868 | |
| MBSQW58_g2869 | MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER |
| MBSQW58_g287 | DUF853 DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g2870 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I |
| MBSQW58_g2871 | HFM1, ATP DEPENDENT DNA HELICASE HOMOLOG |
| MBSQW58_g2872 | |
| MBSQW58_g2873 | KRAB DOMAIN C2H2 ZINC FINGER |
| MBSQW58_g2874 | |
| MBSQW58_g2875 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15 |
| MBSQW58_g2876 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| MBSQW58_g2877 | NFATC2-INTERACTING PROTEIN |
| MBSQW58_g2878 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| MBSQW58_g2879 | AMYLOID PROTEIN-BINDING PROTEIN 2 |
| MBSQW58_g288 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| MBSQW58_g2880 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
| MBSQW58_g2881 | |
| MBSQW58_g2882 | X-BOX BINDING PROTEIN 1 |
| MBSQW58_g2883 | COPINE FAMILY PROTEIN 1 |
| MBSQW58_g2884 | AGAP002036-PA |
| MBSQW58_g2885 | SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED |
| MBSQW58_g2886 | TEKTIN |
| MBSQW58_g2887 | YCCV-LIKE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g2888 | SI:DKEY-261L7.2 |
| MBSQW58_g2889 | THO COMPLEX SUBUNIT 6 HOMOLOG |
| MBSQW58_g289 | RE38146P |
| MBSQW58_g2890 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g2891 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g2892 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| MBSQW58_g2893 | |
| MBSQW58_g2894 | |
| MBSQW58_g2895 | - |
| MBSQW58_g2896 | INTEGRATOR COMPLEX SUBUNIT 2 |
| MBSQW58_g2897 | CHITIN SYNTHASE |
| MBSQW58_g2898 | |
| MBSQW58_g2899 | ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBER |
| MBSQW58_g29 | |
| MBSQW58_g290 | |
| MBSQW58_g2900 | CADHERIN-87A |
| MBSQW58_g2901 | |
| MBSQW58_g2902 | ZINC/IRON TRANSPORTER |
| MBSQW58_g2903 | WHEY ACDIC PROTEIN WAP |
| MBSQW58_g2904 | |
| MBSQW58_g2905 | POTASSIUM CHANNEL, SUBFAMILY K |
| MBSQW58_g2906 | POTASSIUM CHANNEL, SUBFAMILY K |
| MBSQW58_g2907 | ALKALINE PHOSPHATASE |
| MBSQW58_g2908 | ALKALINE PHOSPHATASE |
| MBSQW58_g2909 | MYOSIN |
| MBSQW58_g291 | NXPE FAMILY MEMBER |
| MBSQW58_g2910 | - |
