About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold4761.16135
mRNA.BJAM.scaffold4761.16136ENVOPLAKIN
mRNA.BJAM.scaffold4761.16137ENVOPLAKIN
mRNA.BJAM.scaffold4761.16138ENVOPLAKIN
mRNA.BJAM.scaffold4761.16139
mRNA.BJAM.scaffold4762.16140CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold4762.16141CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.scaffold4763.16142
mRNA.BJAM.scaffold4763.16143LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold4763.16144LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
mRNA.BJAM.scaffold4763.16145LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
mRNA.BJAM.scaffold4764.16146TETRATRICOPEPTIDE REPEAT PROTEIN 5
mRNA.BJAM.scaffold4764.16147
mRNA.BJAM.scaffold4764.16148SCY1-RELATED S/T PROTEIN KINASE-LIKE
mRNA.BJAM.scaffold4764.16149SCY1-RELATED S/T PROTEIN KINASE-LIKE
mRNA.BJAM.scaffold4768.16150
mRNA.BJAM.scaffold4768.16151
mRNA.BJAM.scaffold4768.16152
mRNA.BJAM.scaffold477.3473
mRNA.BJAM.scaffold477.3474STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold477.3475STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold477.3476CORONIN
mRNA.BJAM.scaffold477.3477CORONIN
mRNA.BJAM.scaffold477.3478KRUEPPEL-LIKE TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold477.3479
mRNA.BJAM.scaffold477.3480
mRNA.BJAM.scaffold477.3481ODD-SKIPPED - RELATED
mRNA.BJAM.scaffold477.3482TRANSPOSASE-RELATED
mRNA.BJAM.scaffold477.3483UNCHARACTERIZED
mRNA.BJAM.scaffold477.3484AAA DOMAIN-CONTAINING
mRNA.BJAM.scaffold477.3485MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4
mRNA.BJAM.scaffold477.3486ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
mRNA.BJAM.scaffold477.3487ENOYL-COA HYDRATASE
mRNA.BJAM.scaffold477.3488MONOCARBOXYLATE TRANSPORTER
mRNA.BJAM.scaffold477.3489BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED
mRNA.BJAM.scaffold477.3490
mRNA.BJAM.scaffold477.3491METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED
mRNA.BJAM.scaffold477.3492DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
mRNA.BJAM.scaffold477.3493
mRNA.BJAM.scaffold4771.16153AGAP000281-PA
mRNA.BJAM.scaffold4771.16154FERM DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold4771.16155
mRNA.BJAM.scaffold4771.16156
mRNA.BJAM.scaffold4772.16157RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
mRNA.BJAM.scaffold4775.16158
mRNA.BJAM.scaffold4775.16159
mRNA.BJAM.scaffold4777.16160PATCHED-RELATED
mRNA.BJAM.scaffold4777.16161PATCHED-RELATED
mRNA.BJAM.scaffold4777.16162
mRNA.BJAM.scaffold4777.16163
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