About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold4697.16031GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
mRNA.BJAM.scaffold4697.16032GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
mRNA.BJAM.scaffold4697.16033
mRNA.BJAM.scaffold4697.16034PROTEIN LLP HOMOLOG
mRNA.BJAM.scaffold4698.16035SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
mRNA.BJAM.scaffold4698.16036SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
mRNA.BJAM.scaffold4698.16037STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6
mRNA.BJAM.scaffold4698.16038
mRNA.BJAM.scaffold4698.16039ANTIGEN MLAA-22-RELATED
mRNA.BJAM.scaffold4698.16040ANTIGEN MLAA-22-RELATED
mRNA.BJAM.scaffold4699.16041
mRNA.BJAM.scaffold47.355
mRNA.BJAM.scaffold47.356PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
mRNA.BJAM.scaffold47.357MONOCARBOXYLATE TRANSPORTER
mRNA.BJAM.scaffold47.35830S/40S RIBOSOMAL PROTEIN S4
mRNA.BJAM.scaffold47.359MONOCARBOXYLATE TRANSPORTER
mRNA.BJAM.scaffold47.360
mRNA.BJAM.scaffold47.361EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
mRNA.BJAM.scaffold47.362HIGH MOBILITY GROUP PROTEIN DSP1
mRNA.BJAM.scaffold47.363TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE
mRNA.BJAM.scaffold47.364CCCH ZINC FINGER/TIS11-RELATED
mRNA.BJAM.scaffold47.365GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
mRNA.BJAM.scaffold47.366SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
mRNA.BJAM.scaffold47.367CHARGED MULTIVESICULAR BODY PROTEIN
mRNA.BJAM.scaffold47.368LYMPHOID-SPECIFIC HELICASE
mRNA.BJAM.scaffold47.369RIBONUCLEASE P PROTEIN SUBUNIT P14
mRNA.BJAM.scaffold47.370
mRNA.BJAM.scaffold47.371
mRNA.BJAM.scaffold47.372PROTEIN C21ORF59
mRNA.BJAM.scaffold47.373ADP RIBOSYLATION FACTOR-RELATED
mRNA.BJAM.scaffold470.3444
mRNA.BJAM.scaffold470.3445
mRNA.BJAM.scaffold470.3446CCAAT/ENHANCER BINDING PROTEIN
mRNA.BJAM.scaffold470.3447PROTEIN STAR
mRNA.BJAM.scaffold4703.16043
mRNA.BJAM.scaffold4706.16044LYSINE-SPECIFIC DEMETHYLASE
mRNA.BJAM.scaffold4706.16045
mRNA.BJAM.scaffold4706.16046
mRNA.BJAM.scaffold4707.16047
mRNA.BJAM.scaffold4710.16048OPSIN
mRNA.BJAM.scaffold4710.16049DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold4711.16050METALLOPROTEASE TLDD
mRNA.BJAM.scaffold4711.16051MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.scaffold4711.16052MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.scaffold4711.16053
mRNA.BJAM.scaffold4711.16054
mRNA.BJAM.scaffold4712.16055
mRNA.BJAM.scaffold4712.16056PHOSPHATIDYLINOSITOL KINASE
mRNA.BJAM.scaffold4712.16057PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN
mRNA.BJAM.scaffold4713.16058SEMAPHORIN
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