About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold4623.15921ATP-BINDING TRANSPORT PROTEIN-RELATED
mRNA.BJAM.scaffold4623.15922PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
mRNA.BJAM.scaffold4626.15923O-METHYLTRANSFERASE-RELATED
mRNA.BJAM.scaffold4627.15924
mRNA.BJAM.scaffold4627.15925DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold4627.15926DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold4627.15927DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold4628.15928TSC22
mRNA.BJAM.scaffold4629.15929PROTEIN CBG20215-RELATED
mRNA.BJAM.scaffold463.3398CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold463.3399
mRNA.BJAM.scaffold463.3400TSEC-2-RELATED
mRNA.BJAM.scaffold463.3401
mRNA.BJAM.scaffold4630.15930UNCHARACTERIZED
mRNA.BJAM.scaffold4630.15931
mRNA.BJAM.scaffold4634.15932
mRNA.BJAM.scaffold4634.15933RHO-TYPE GTPASE ACTIVATING PROTEIN
mRNA.BJAM.scaffold4635.15934ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold4635.15935UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
mRNA.BJAM.scaffold4638.15936DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER
mRNA.BJAM.scaffold4639.15937CASPASE-ACTIVATED DNASE
mRNA.BJAM.scaffold4639.15938CASPASE-ACTIVATED DNASE
mRNA.BJAM.scaffold464.3402PROTEIN KINASE C, MU
mRNA.BJAM.scaffold464.3403PROTEIN KINASE C, MU
mRNA.BJAM.scaffold464.3404PROTEIN KINASE C, MU
mRNA.BJAM.scaffold464.3405RAS GTPASE-ACTIVATING PROTEINS
mRNA.BJAM.scaffold464.3406RAS GTPASE-ACTIVATING PROTEINS
mRNA.BJAM.scaffold464.340760S RIBOSOMAL PROTEIN L10
mRNA.BJAM.scaffold464.3408
mRNA.BJAM.scaffold464.3409
mRNA.BJAM.scaffold464.3410PROTEIN O-MANNOSYL-TRANSFERASE TMTC2
mRNA.BJAM.scaffold4640.15939PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold4640.15940PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold4640.15941TRANSPOSASE-RELATED
mRNA.BJAM.scaffold4640.15942
mRNA.BJAM.scaffold4640.15943GLUTAMATE DEHYDROGENASE
mRNA.BJAM.scaffold4640.15944GLUTAMATE DEHYDROGENASE
mRNA.BJAM.scaffold4641.15945TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold4641.15946HAMARTIN
mRNA.BJAM.scaffold4643.15947PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold4643.15948SURFEIT LOCUS PROTEIN
mRNA.BJAM.scaffold4643.15949
mRNA.BJAM.scaffold4643.15950YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER
mRNA.BJAM.scaffold4644.15951
mRNA.BJAM.scaffold4644.1595226S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED
mRNA.BJAM.scaffold4645.15953DACHSHUND
mRNA.BJAM.scaffold4645.15954
mRNA.BJAM.scaffold4645.15955DACHSHUND
mRNA.BJAM.scaffold4646.15956
mRNA.BJAM.scaffold4646.15957LD33804P
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