About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold4481.15750
mRNA.BJAM.scaffold4484.15751
mRNA.BJAM.scaffold4485.15752RIBOSOMAL S SUBUNIT
mRNA.BJAM.scaffold4487.15753
mRNA.BJAM.scaffold4487.15754ATP-DEPENDENT RNA HELICASE RHLE-RELATED
mRNA.BJAM.scaffold4488.15755CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold4489.15756
mRNA.BJAM.scaffold449.3319
mRNA.BJAM.scaffold449.3320CELL DIVISION PROTEIN KINASE
mRNA.BJAM.scaffold449.3321PROTEIN KINASE RELATED
mRNA.BJAM.scaffold449.3322ZGC:101016
mRNA.BJAM.scaffold449.3323TRANSCRIPTION INITIATION FACTOR IIB-RELATED
mRNA.BJAM.scaffold449.3324HSC70-INTERACTING PROTEIN
mRNA.BJAM.scaffold449.3325TRANSMEMBRANE GTPASE FZO
mRNA.BJAM.scaffold449.3326BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 1A
mRNA.BJAM.scaffold449.3327INWARD RECTIFIER POTASSIUM CHANNEL
mRNA.BJAM.scaffold449.3328MYD88
mRNA.BJAM.scaffold449.3329ANKYRIN REPEAT FAMILY PROTEIN
mRNA.BJAM.scaffold449.3330ALCOHOL O-ACETYLTRANSFERASE 1-RELATED
mRNA.BJAM.scaffold449.3331
mRNA.BJAM.scaffold4490.15757SULFOTRANSFERASE SULT
mRNA.BJAM.scaffold4491.15758EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
mRNA.BJAM.scaffold4491.15759
mRNA.BJAM.scaffold4491.15760
mRNA.BJAM.scaffold4491.15761SODIUM-BILE ACID COTRANSPORTER
mRNA.BJAM.scaffold4492.15762SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED
mRNA.BJAM.scaffold4493.1576339S RIBOSOMAL PROTEIN L32, MITOCHONDRIAL
mRNA.BJAM.scaffold4494.15764
mRNA.BJAM.scaffold4495.15765
mRNA.BJAM.scaffold4495.15766
mRNA.BJAM.scaffold4495.15767ACTIVATING TRANSCRIPTION FACTOR 7 INTERACTING PROTEIN
mRNA.BJAM.scaffold4496.15768
mRNA.BJAM.scaffold4496.15769
mRNA.BJAM.scaffold4496.15770
mRNA.BJAM.scaffold4496.15771
mRNA.BJAM.scaffold4496.15772
mRNA.BJAM.scaffold4496.15773
mRNA.BJAM.scaffold4496.15774
mRNA.BJAM.scaffold4496.15775
mRNA.BJAM.scaffold4498.15776
mRNA.BJAM.scaffold4498.15777
mRNA.BJAM.scaffold4498.15778
mRNA.BJAM.scaffold4498.15779
mRNA.BJAM.scaffold4499.15780EXOCYST COMPLEX COMPONENT SEC6-RELATED
mRNA.BJAM.scaffold4499.15781
mRNA.BJAM.scaffold45.352
mRNA.BJAM.scaffold45.353SIDESTEP PROTEIN
mRNA.BJAM.scaffold450.3332ACYL-COA THIOESTERASE
mRNA.BJAM.scaffold450.3333
mRNA.BJAM.scaffold450.3334G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
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