About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold4361.15572
mRNA.BJAM.scaffold4363.15573UNCHARACTERIZED
mRNA.BJAM.scaffold4364.15574
mRNA.BJAM.scaffold4365.15575PROTEIN DISULFIDE ISOMERASE
mRNA.BJAM.scaffold4365.15576G-PROTEIN COUPLED RECEPTOR 89-RELATED
mRNA.BJAM.scaffold4366.15577
mRNA.BJAM.scaffold4366.15578SIDESTEP PROTEIN
mRNA.BJAM.scaffold4366.15579
mRNA.BJAM.scaffold4366.15580ZINC FINGER PROTEIN
mRNA.BJAM.scaffold4367.15581-
mRNA.BJAM.scaffold4368.15582
mRNA.BJAM.scaffold4369.15583
mRNA.BJAM.scaffold4369.15584RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
mRNA.BJAM.scaffold437.3247
mRNA.BJAM.scaffold437.3248DIHYDROPTERIDINE REDUCTASE
mRNA.BJAM.scaffold4371.15585ETS
mRNA.BJAM.scaffold4371.15586
mRNA.BJAM.scaffold4372.15587
mRNA.BJAM.scaffold4373.15588CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold4373.15589
mRNA.BJAM.scaffold4373.15590
mRNA.BJAM.scaffold4373.15591
mRNA.BJAM.scaffold4373.15592NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT
mRNA.BJAM.scaffold4374.15593GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
mRNA.BJAM.scaffold4374.15594
mRNA.BJAM.scaffold4374.15595
mRNA.BJAM.scaffold4374.15596PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER
mRNA.BJAM.scaffold4378.15597ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold4378.15598ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold4379.15599TRNA MODIFICATION GTPASE GTPBP3
mRNA.BJAM.scaffold4379.15600TRANSPOSASE-RELATED
mRNA.BJAM.scaffold4379.15601
mRNA.BJAM.scaffold4379.15602PROTEIN DISULFIDE-ISOMERASE TMX3
mRNA.BJAM.scaffold4382.15603ADP RIBOSYLATION FACTOR-RELATED
mRNA.BJAM.scaffold4382.15604SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED
mRNA.BJAM.scaffold4382.15605SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED
mRNA.BJAM.scaffold4384.15606G-PROTEIN COUPLED RECEPTOR 158-RELATED
mRNA.BJAM.scaffold4386.15607DNA REPAIR/RNA PROCESSING CPSF FAMILY
mRNA.BJAM.scaffold4386.15608SEC63 DOMAIN-CONTAINING
mRNA.BJAM.scaffold4387.15609
mRNA.BJAM.scaffold4387.15610TUBBY-RELATED
mRNA.BJAM.scaffold4387.15611G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP
mRNA.BJAM.scaffold4387.15612G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP
mRNA.BJAM.scaffold4387.15613TRANSPOSASE-RELATED
mRNA.BJAM.scaffold4387.15614BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
mRNA.BJAM.scaffold4392.15615
mRNA.BJAM.scaffold4395.15616ACYL-COENZYME A THIOESTERASE-RELATED
mRNA.BJAM.scaffold4395.15617MANNOSE-6-PHOSPHATE ISOMERASE
mRNA.BJAM.scaffold4395.15618SARCOGLYCANS
mRNA.BJAM.scaffold4397.15619
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