About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold4713.16059SEMAPHORIN
mRNA.BJAM.scaffold4714.16060CADHERIN-87A
mRNA.BJAM.scaffold4714.16061FAT ATYPICAL CADHERIN-RELATED
mRNA.BJAM.scaffold4714.16062CADHERIN-23
mRNA.BJAM.scaffold4714.16063
mRNA.BJAM.scaffold4714.16064DESMOGLEIN FAMILY MEMBER
mRNA.BJAM.scaffold4714.16065CADHERIN-87A
mRNA.BJAM.scaffold4718.16066GLIAL FACTOR NATURATION FACTOR
mRNA.BJAM.scaffold4718.16067ZINC FINGER PROTEIN
mRNA.BJAM.scaffold472.3448
mRNA.BJAM.scaffold472.3449
mRNA.BJAM.scaffold472.3450MATRIX PROTEIN, PUTATIVE-RELATED
mRNA.BJAM.scaffold472.3451
mRNA.BJAM.scaffold472.3452CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
mRNA.BJAM.scaffold4724.16068GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
mRNA.BJAM.scaffold4726.16069SIDESTEP PROTEIN
mRNA.BJAM.scaffold4726.16070
mRNA.BJAM.scaffold4727.16071UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1
mRNA.BJAM.scaffold4727.16072UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1
mRNA.BJAM.scaffold4727.16073UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1
mRNA.BJAM.scaffold4727.16074UNCHARACTERIZED
mRNA.BJAM.scaffold4727.16075
mRNA.BJAM.scaffold4727.16076
mRNA.BJAM.scaffold4729.16077
mRNA.BJAM.scaffold4729.16078
mRNA.BJAM.scaffold4729.16079
mRNA.BJAM.scaffold4729.16080SERINE PROTEASE-RELATED
mRNA.BJAM.scaffold4729.16081
mRNA.BJAM.scaffold4729.16083
mRNA.BJAM.scaffold473.3453
mRNA.BJAM.scaffold473.3454
mRNA.BJAM.scaffold473.3455RIBOSE-5-PHOSPHATE ISOMERASE
mRNA.BJAM.scaffold473.3456G-PROTEIN COUPLED RECEPTOR MTH-LIKE 1-RELATED
mRNA.BJAM.scaffold473.3457
mRNA.BJAM.scaffold473.3458PHOSPHOETHANOLAMINE METHYLTRANSFERASE
mRNA.BJAM.scaffold473.3459FI17866P1
mRNA.BJAM.scaffold4732.16084SODIUM/POTASSIUM/CALCIUM EXCHANGER
mRNA.BJAM.scaffold4733.16085MOTOR NEURON AND PANCREAS HOMEOBOX PROTEIN
mRNA.BJAM.scaffold4733.16086
mRNA.BJAM.scaffold4733.16087INTRAFLAGELLAR TRANSPORT PROTEIN 122 FAMILY PROTEIN-RELATED
mRNA.BJAM.scaffold4735.16088
mRNA.BJAM.scaffold4735.16089LUPUS LA PROTEIN-RELATED
mRNA.BJAM.scaffold4735.16090PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
mRNA.BJAM.scaffold4735.16091
mRNA.BJAM.scaffold4737.16092CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
mRNA.BJAM.scaffold4739.16093
mRNA.BJAM.scaffold4739.16094DYNEIN HEAVY CHAIN FAMILY PROTEIN
mRNA.BJAM.scaffold4739.16095DYNEIN HEAVY CHAIN FAMILY PROTEIN
mRNA.BJAM.scaffold4739.16096BETA-1,4-MANNOSYLTRANSFERASE EGH
mRNA.BJAM.scaffold4739.16097KICSTOR COMPLEX PROTEIN KAPTIN
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