About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold4821.16222XAA-PRO AMINOPEPTIDASE 1
mRNA.BJAM.scaffold4821.16223TRANSPOSASE-RELATED
mRNA.BJAM.scaffold4821.16224CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING
mRNA.BJAM.scaffold4823.16225MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
mRNA.BJAM.scaffold4823.16226MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
mRNA.BJAM.scaffold4823.16228RH14732P
mRNA.BJAM.scaffold4823.16229HFM1, ATP DEPENDENT DNA HELICASE HOMOLOG
mRNA.BJAM.scaffold4823.16230
mRNA.BJAM.scaffold4823.16231HFM1, ATP DEPENDENT DNA HELICASE HOMOLOG
mRNA.BJAM.scaffold4823.16232HFM1, ATP DEPENDENT DNA HELICASE HOMOLOG
mRNA.BJAM.scaffold4824.16233SODIUM/CHLORIDE DEPENDENT TRANSPORTER
mRNA.BJAM.scaffold4825.16234ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI
mRNA.BJAM.scaffold4825.16235
mRNA.BJAM.scaffold4825.16236
mRNA.BJAM.scaffold4825.16237
mRNA.BJAM.scaffold4825.16238
mRNA.BJAM.scaffold4825.16239
mRNA.BJAM.scaffold4826.16240MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
mRNA.BJAM.scaffold4826.16241F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
mRNA.BJAM.scaffold4829.16242
mRNA.BJAM.scaffold483.3536LATE ENDOSOMAL/LYSOSOMAL MP1 INTERACTING PROTEIN
mRNA.BJAM.scaffold483.3537PHOSPHATIDYLINOSITOL KINASE
mRNA.BJAM.scaffold483.3538PHOSPHATIDYLINOSITOL KINASE
mRNA.BJAM.scaffold483.3539
mRNA.BJAM.scaffold483.3540
mRNA.BJAM.scaffold483.3541
mRNA.BJAM.scaffold483.3542
mRNA.BJAM.scaffold483.3543CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
mRNA.BJAM.scaffold483.3544
mRNA.BJAM.scaffold483.3545GROUP XII SECRETORY PHOSPHOLIPASE A2 FAMILY MEMBER
mRNA.BJAM.scaffold483.3546AGAP008648-PA
mRNA.BJAM.scaffold483.3547
mRNA.BJAM.scaffold4831.16243PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE
mRNA.BJAM.scaffold4831.16244UNCHARACTERIZED
mRNA.BJAM.scaffold4831.16245UNCHARACTERIZED
mRNA.BJAM.scaffold4831.16246GLUTAMATE--TRNA LIGASE
mRNA.BJAM.scaffold4834.16247PLEXIN
mRNA.BJAM.scaffold4837.16248MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED
mRNA.BJAM.scaffold4839.16249LD33804P
mRNA.BJAM.scaffold4839.16250
mRNA.BJAM.scaffold4839.16251SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
mRNA.BJAM.scaffold4839.16252
mRNA.BJAM.scaffold4839.16253
mRNA.BJAM.scaffold4839.16254
mRNA.BJAM.scaffold484.3548SEQUESTOSOME 1-RELATED
mRNA.BJAM.scaffold484.3549TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED
mRNA.BJAM.scaffold484.3550LEPRECAN 1
mRNA.BJAM.scaffold484.3551PROTEIN LYSINE HYDROXYLATION COMPLEX COMPONENT
mRNA.BJAM.scaffold484.3552INOSITOL 5-PHOSPHATASE
mRNA.BJAM.scaffold484.3553TRANSCRIPTION FACTOR AP-2
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