About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold4063.15046MULTIPLE PDZ DOMAIN PROTEIN
mRNA.BJAM.scaffold4065.15047BEAT PROTEIN
mRNA.BJAM.scaffold4066.15048PROFILIN
mRNA.BJAM.scaffold4066.15049
mRNA.BJAM.scaffold4067.15050LEUCOKININ RECEPTOR-RELATED
mRNA.BJAM.scaffold4068.15051
mRNA.BJAM.scaffold4068.15052TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED
mRNA.BJAM.scaffold4073.15053
mRNA.BJAM.scaffold4073.15054
mRNA.BJAM.scaffold4073.15055
mRNA.BJAM.scaffold4073.150563'-5' EXONUCLEASE ERI1-RELATED
mRNA.BJAM.scaffold4073.15057
mRNA.BJAM.scaffold4075.15058WD REPEAT DOMAIN 60
mRNA.BJAM.scaffold4075.15059
mRNA.BJAM.scaffold4075.15060HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT
mRNA.BJAM.scaffold4075.15061
mRNA.BJAM.scaffold4075.15062STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold4076.15063DNA-BINDING PROTEIN INHIBITOR
mRNA.BJAM.scaffold4076.15064
mRNA.BJAM.scaffold4078.15065
mRNA.BJAM.scaffold4079.150666-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
mRNA.BJAM.scaffold408.3051
mRNA.BJAM.scaffold4080.15067
mRNA.BJAM.scaffold4080.15068COLON CANCER-ASSOCIATED PROTEIN MIC1
mRNA.BJAM.scaffold4081.15069RHO GUANINE EXCHANGE FACTOR-RELATED
mRNA.BJAM.scaffold4081.15070RHO GUANINE EXCHANGE FACTOR-RELATED
mRNA.BJAM.scaffold4081.15071PEPTIDASE
mRNA.BJAM.scaffold4082.15072TRANSMEMBRANE PROTEIN 151 HOMOLOG
mRNA.BJAM.scaffold4082.15073
mRNA.BJAM.scaffold4082.15074GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
mRNA.BJAM.scaffold4082.15075GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
mRNA.BJAM.scaffold4083.15076
mRNA.BJAM.scaffold4083.15077PHD FINGER PROTEIN
mRNA.BJAM.scaffold4085.15078
mRNA.BJAM.scaffold4085.15079
mRNA.BJAM.scaffold4085.15080
mRNA.BJAM.scaffold4085.15081
mRNA.BJAM.scaffold4085.15082
mRNA.BJAM.scaffold4085.15083
mRNA.BJAM.scaffold4085.15084
mRNA.BJAM.scaffold4085.15085VITELLOGENIN-RELATED
mRNA.BJAM.scaffold4085.15086
mRNA.BJAM.scaffold4086.15087SHORT-CHAIN DEHYDROGENASE/REDUCTASE
mRNA.BJAM.scaffold4086.15088BTB/POZ DOMAIN-CONTAINING
mRNA.BJAM.scaffold4087.15089G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold4088.15090
mRNA.BJAM.scaffold409.3052
mRNA.BJAM.scaffold409.3053SIDESTEP PROTEIN
mRNA.BJAM.scaffold409.3054SIDESTEP PROTEIN
mRNA.BJAM.scaffold409.3055
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