About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold4111.15128
mRNA.BJAM.scaffold4111.15129SULFOTRANSFERASE SULT
mRNA.BJAM.scaffold4112.15130
mRNA.BJAM.scaffold4113.15131
mRNA.BJAM.scaffold4114.15132LASP
mRNA.BJAM.scaffold4114.15133LASP
mRNA.BJAM.scaffold4115.15134
mRNA.BJAM.scaffold4116.15135
mRNA.BJAM.scaffold4117.15136STRAWBERRY NOTCH-RELATED
mRNA.BJAM.scaffold4117.15137CUTICLE PROTEIN
mRNA.BJAM.scaffold4117.15138CUTICLE PROTEIN
mRNA.BJAM.scaffold4117.15139CUTICLE PROTEIN
mRNA.BJAM.scaffold4117.15140CUTICLE PROTEIN
mRNA.BJAM.scaffold4117.15141CUTICLE PROTEIN
mRNA.BJAM.scaffold4117.15142CUTICLE PROTEIN
mRNA.BJAM.scaffold4117.15143CUTICLE PROTEIN
mRNA.BJAM.scaffold412.3062BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
mRNA.BJAM.scaffold412.3063
mRNA.BJAM.scaffold412.306660S RIBOSOMAL PROTEIN L3-RELATED
mRNA.BJAM.scaffold412.3067
mRNA.BJAM.scaffold412.3068
mRNA.BJAM.scaffold412.3069OPSIN
mRNA.BJAM.scaffold412.3070PHOSPHOLIPASE D
mRNA.BJAM.scaffold412.3071
mRNA.BJAM.scaffold4121.15144DIACYLGLYCEROL KINASE
mRNA.BJAM.scaffold4121.15145ANKYRIN REPEAT FAMILY PROTEIN
mRNA.BJAM.scaffold4121.151474.1 G PROTEIN
mRNA.BJAM.scaffold4121.15148SOLUBLE NSF ATTACHMENT PROTEIN SNAP
mRNA.BJAM.scaffold4122.15149
mRNA.BJAM.scaffold4124.15150
mRNA.BJAM.scaffold4124.15151
mRNA.BJAM.scaffold4124.15152TRANSMEMBRANE PROTEASE SERINE
mRNA.BJAM.scaffold4124.151538-OXOGUANINE DNA GLYCOSYLASE
mRNA.BJAM.scaffold4124.15154RNA POLYMERASE II CTD PHOSPHATASE
mRNA.BJAM.scaffold4125.15155PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4
mRNA.BJAM.scaffold4125.15156PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4
mRNA.BJAM.scaffold4125.15157PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4
mRNA.BJAM.scaffold4125.15158PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4
mRNA.BJAM.scaffold4126.15159TRANS-GOLGI PROTEIN GMX33
mRNA.BJAM.scaffold4127.15160SEC31-RELATED PROTEIN
mRNA.BJAM.scaffold4127.15161PROTEASOME SUBUNIT ALPHA/BETA
mRNA.BJAM.scaffold413.3072TROPONIN T
mRNA.BJAM.scaffold413.3073
mRNA.BJAM.scaffold413.3074DNA REPLICATION FACTOR CDT1
mRNA.BJAM.scaffold413.3075RE41427P
mRNA.BJAM.scaffold413.3076TETRASPANIN
mRNA.BJAM.scaffold413.3077DNA REPLICATION FACTOR CDT1
mRNA.BJAM.scaffold413.3078DNA REPLICATION FACTOR CDT1
mRNA.BJAM.scaffold413.3079
mRNA.BJAM.scaffold4130.15162HOMEOBOX PROTEIN ARISTALESS
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