About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold418.3100HUNTINGTON DISEASE PROTEIN
mRNA.BJAM.scaffold418.3101HUNTINGTON DISEASE PROTEIN
mRNA.BJAM.scaffold418.3102HUNTINGTON DISEASE PROTEIN
mRNA.BJAM.scaffold418.3103NEUROTRANSMITTER GATED ION CHANNEL
mRNA.BJAM.scaffold4180.15243UNCHARACTERIZED
mRNA.BJAM.scaffold4180.15244
mRNA.BJAM.scaffold4181.15245CDC68 RELATED
mRNA.BJAM.scaffold4181.15246CDC68 RELATED
mRNA.BJAM.scaffold4181.15247TETRASPANIN
mRNA.BJAM.scaffold4181.15248TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold4181.15249IG-LIKE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold4182.15250NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN
mRNA.BJAM.scaffold4184.15251
mRNA.BJAM.scaffold4184.15252NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
mRNA.BJAM.scaffold4184.15253NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
mRNA.BJAM.scaffold4185.15254
mRNA.BJAM.scaffold4185.15255XANTHINE DEHYDROGENASE
mRNA.BJAM.scaffold4186.15256AGAP001581-PA
mRNA.BJAM.scaffold419.3104
mRNA.BJAM.scaffold4190.15257ZGC:174356
mRNA.BJAM.scaffold4190.15258
mRNA.BJAM.scaffold4190.15259
mRNA.BJAM.scaffold4192.15260NEUROPEPTIDE Y RECEPTOR
mRNA.BJAM.scaffold4195.15261-
mRNA.BJAM.scaffold4196.15262
mRNA.BJAM.scaffold4197.15263DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
mRNA.BJAM.scaffold4197.15264RAC GTPASE-ACTIVATING PROTEIN 1
mRNA.BJAM.scaffold4197.15265PNAS-3 RELATED
mRNA.BJAM.scaffold4197.15266GLYCINE CLEAVAGE SYSTEM H PROTEIN
mRNA.BJAM.scaffold4198.15267
mRNA.BJAM.scaffold4198.15268RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold42.310DOPAMINE BETA HYDROXYLASE RELATED
mRNA.BJAM.scaffold42.311UNCHARACTERIZED
mRNA.BJAM.scaffold42.312RHOMBOID-RELATED PROTEIN
mRNA.BJAM.scaffold42.313BETA1,3-GALACTOSYLTRANSFERASE
mRNA.BJAM.scaffold42.314LONG-CHAIN-FATTY-ACID--COA LIGASE
mRNA.BJAM.scaffold42.315LONG-CHAIN-FATTY-ACID--COA LIGASE
mRNA.BJAM.scaffold42.316LONG-CHAIN-FATTY-ACID--COA LIGASE
mRNA.BJAM.scaffold42.317ATP-DEPENDENT RNA HELICASE RHLE-RELATED
mRNA.BJAM.scaffold42.31860S RIBOSOMAL PROTEIN L37A
mRNA.BJAM.scaffold42.319PROTEASOME REGULATOR PA28
mRNA.BJAM.scaffold42.321
mRNA.BJAM.scaffold42.322
mRNA.BJAM.scaffold42.323ADENOSYLHOMOCYSTEINASE
mRNA.BJAM.scaffold42.324CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
mRNA.BJAM.scaffold42.325UNCHARACTERIZED
mRNA.BJAM.scaffold420.3105BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
mRNA.BJAM.scaffold420.3106
mRNA.BJAM.scaffold420.3107
mRNA.BJAM.scaffold420.3108WD-REPEAT PROTEIN-RELATED
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