About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold10719.21406
mRNA.BJAM.scaffold1072.6405
mRNA.BJAM.scaffold10725.21407
mRNA.BJAM.scaffold10725.21408
mRNA.BJAM.scaffold10725.21409
mRNA.BJAM.scaffold10728.2141060S RIBOSOMAL PROTEIN L10
mRNA.BJAM.scaffold10728.21411
mRNA.BJAM.scaffold10729.21412ALPHA-GLUCOSIDASE
mRNA.BJAM.scaffold10729.21413
mRNA.BJAM.scaffold1073.6406MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L51
mRNA.BJAM.scaffold1073.6407SKELETOR-RELATED
mRNA.BJAM.scaffold1073.6408
mRNA.BJAM.scaffold1073.6409CELL DIVISION CYCLE 16,23,27
mRNA.BJAM.scaffold1073.6410
mRNA.BJAM.scaffold1073.6411CENTROMERE PROTEIN V
mRNA.BJAM.scaffold1073.6412ZINC FINGER-CONTAINING PROTEIN P48ZNF
mRNA.BJAM.scaffold1073.6413
mRNA.BJAM.scaffold1073.6414
mRNA.BJAM.scaffold1073.6415
mRNA.BJAM.scaffold1073.6416
mRNA.BJAM.scaffold1073.6417ACTIN
mRNA.BJAM.scaffold10730.21414
mRNA.BJAM.scaffold10731.21415DELTA-AMINOLEVULINIC ACID DEHYDRATASE
mRNA.BJAM.scaffold10732.21416LIM DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold10732.21417
mRNA.BJAM.scaffold1074.6418ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold1074.6419PRE-MRNA SPLICING FACTOR
mRNA.BJAM.scaffold1074.6420TRANSCRIPTION ELONGATION REGULATOR 1
mRNA.BJAM.scaffold1074.6421
mRNA.BJAM.scaffold1074.6422
mRNA.BJAM.scaffold1074.6423MYOSIN
mRNA.BJAM.scaffold1074.6424RECEPTOR TRANSPORTING PROTEIN
mRNA.BJAM.scaffold10743.21418ZINC/IRON TRANSPORTER
mRNA.BJAM.scaffold10743.21419SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
mRNA.BJAM.scaffold10743.21420SODIUM/DICARBOXYLATE SYMPORTER-RELATED
mRNA.BJAM.scaffold10744.21421HISTIDYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold10744.21422IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold10745.21423
mRNA.BJAM.scaffold10746.21424
mRNA.BJAM.scaffold10748.21425ACETYL-COA C-ACYLTRANSFERASE
mRNA.BJAM.scaffold10750.21426
mRNA.BJAM.scaffold10758.21427PROTEIN ZERKNUELLT 1-RELATED
mRNA.BJAM.scaffold1076.6425FI24210P1
mRNA.BJAM.scaffold1076.6426-
mRNA.BJAM.scaffold1076.6427CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold1076.6428EUKARYOTIC TRANSLATION INITIATION FACTOR 3
mRNA.BJAM.scaffold1076.6429THIAMIN PYROPHOSPHOKINASE
mRNA.BJAM.scaffold10765.21428
mRNA.BJAM.scaffold10765.21429NEUROTRANSMITTER GATED ION CHANNEL
mRNA.BJAM.scaffold10767.2143050S RIBOSOMAL PROTEIN L15
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