About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold10477.21309MALE FERTILITY FACTOR KL5
mRNA.BJAM.scaffold10477.21310MALE FERTILITY FACTOR KL5
mRNA.BJAM.scaffold10479.21311PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
mRNA.BJAM.scaffold1048.6312NUCLEAR HORMONE RECEPTOR
mRNA.BJAM.scaffold1048.6313NUCLEAR HORMONE RECEPTOR
mRNA.BJAM.scaffold10485.21313NEMITIN (NEURONAL ENRICHED MAP INTERACTING PROTEIN) HOMOLOG
mRNA.BJAM.scaffold10486.21314
mRNA.BJAM.scaffold1049.6314CELL DIVISION PROTEIN KINASE
mRNA.BJAM.scaffold1049.6315
mRNA.BJAM.scaffold1049.6316NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER
mRNA.BJAM.scaffold1049.6317PRENYLTRANSFERASES
mRNA.BJAM.scaffold10491.21315
mRNA.BJAM.scaffold105.814AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED
mRNA.BJAM.scaffold1050.6318ANNEXIN
mRNA.BJAM.scaffold1050.6319ANNEXIN
mRNA.BJAM.scaffold1050.6320ANNEXIN
mRNA.BJAM.scaffold1050.6321ANNEXIN
mRNA.BJAM.scaffold1050.6322ANNEXIN
mRNA.BJAM.scaffold1050.6323PHOSPHOETHANOLAMINE METHYLTRANSFERASE
mRNA.BJAM.scaffold10502.21316TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
mRNA.BJAM.scaffold10502.21317TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
mRNA.BJAM.scaffold10502.21318TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
mRNA.BJAM.scaffold10502.21319
mRNA.BJAM.scaffold10507.21322
mRNA.BJAM.scaffold10507.21323JNK-INTERACTING PROTEIN 1-LIKE PROTEIN
mRNA.BJAM.scaffold10507.21324
mRNA.BJAM.scaffold10511.21325GUANINE NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold10514.21327NF-E2 INDUCIBLE PROTEIN
mRNA.BJAM.scaffold10514.21328NF-E2 INDUCIBLE PROTEIN
mRNA.BJAM.scaffold10516.21329
mRNA.BJAM.scaffold1052.6324
mRNA.BJAM.scaffold1052.6325
mRNA.BJAM.scaffold1052.6326
mRNA.BJAM.scaffold1052.6327
mRNA.BJAM.scaffold10528.21330CARBOHYDRATE SULFOTRANSFERASE
mRNA.BJAM.scaffold10534.21331
mRNA.BJAM.scaffold10536.21332BUD13 HOMOLOG
mRNA.BJAM.scaffold10536.21333BUD13 HOMOLOG
mRNA.BJAM.scaffold1054.6328
mRNA.BJAM.scaffold1054.6329RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold10541.21334WD40 REPEAT FAMILY
mRNA.BJAM.scaffold10541.21335SYNAPTIC ADHESION-LIKE MOLECULE SALM
mRNA.BJAM.scaffold10541.21336
mRNA.BJAM.scaffold10548.21337
mRNA.BJAM.scaffold10548.21338
mRNA.BJAM.scaffold1055.6330N-LYSINE METHYLTRANSFERASE KMT5A
mRNA.BJAM.scaffold1055.6331
mRNA.BJAM.scaffold1055.6332UNCHARACTERIZED
mRNA.BJAM.scaffold1055.6333INVERTED FORMIN-2
mRNA.BJAM.scaffold1055.6334INVERTED FORMIN-2
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