About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1033.6262
mRNA.BJAM.scaffold10334.21209LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold10334.21210VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
mRNA.BJAM.scaffold10336.21211
mRNA.BJAM.scaffold10336.21212CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold10337.21213
mRNA.BJAM.scaffold10341.21214
mRNA.BJAM.scaffold10342.21215
mRNA.BJAM.scaffold10342.21216
mRNA.BJAM.scaffold10344.21217
mRNA.BJAM.scaffold10344.21218UNCHARACTERIZED
mRNA.BJAM.scaffold10345.21219PROTEIN DOK-7
mRNA.BJAM.scaffold1035.6263
mRNA.BJAM.scaffold1035.6264
mRNA.BJAM.scaffold1035.6265ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
mRNA.BJAM.scaffold1035.6266ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
mRNA.BJAM.scaffold10350.21220G-PROTEIN COUPLED RECEPTOR MTH-LIKE 1-RELATED
mRNA.BJAM.scaffold10350.212212-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED
mRNA.BJAM.scaffold10358.21222CYTOSOLIC REGULATOR PIANISSIMO
mRNA.BJAM.scaffold10358.21223ACTIN
mRNA.BJAM.scaffold10358.21224ACTIN
mRNA.BJAM.scaffold10358.21225ACTIN
mRNA.BJAM.scaffold10358.21226ACTIN
mRNA.BJAM.scaffold1036.6267ARRESTIN
mRNA.BJAM.scaffold1036.6268ARRESTIN
mRNA.BJAM.scaffold1036.6269NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
mRNA.BJAM.scaffold1036.6270CDNA SEQUENCE BC021608
mRNA.BJAM.scaffold1036.6271PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
mRNA.BJAM.scaffold1036.6272PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
mRNA.BJAM.scaffold1036.6273PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
mRNA.BJAM.scaffold10364.21227
mRNA.BJAM.scaffold10364.21228MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED
mRNA.BJAM.scaffold10365.21229
mRNA.BJAM.scaffold10365.21230E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
mRNA.BJAM.scaffold10366.21231DELTA(14)-STEROL REDUCTASE
mRNA.BJAM.scaffold10368.21232
mRNA.BJAM.scaffold10368.21233
mRNA.BJAM.scaffold10368.21234ELONGATION FACTOR TU-RELATED
mRNA.BJAM.scaffold1037.6274
mRNA.BJAM.scaffold10373.21235TYROSINE-PROTEIN KINASE
mRNA.BJAM.scaffold10373.21236
mRNA.BJAM.scaffold10374.21238
mRNA.BJAM.scaffold10375.21239
mRNA.BJAM.scaffold1038.6275BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN
mRNA.BJAM.scaffold1038.6276
mRNA.BJAM.scaffold1038.6277
mRNA.BJAM.scaffold1038.6278
mRNA.BJAM.scaffold10382.21240RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
mRNA.BJAM.scaffold10382.21241ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold10383.21242
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