About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1018.6202
mRNA.BJAM.scaffold1018.6203KRUEPPEL-LIKE TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold1018.6204SERINE-THREONINE PROTEIN KINASE
mRNA.BJAM.scaffold10182.21151
mRNA.BJAM.scaffold10186.21152
mRNA.BJAM.scaffold10186.21153
mRNA.BJAM.scaffold10188.21154
mRNA.BJAM.scaffold10188.21155
mRNA.BJAM.scaffold10191.21156
mRNA.BJAM.scaffold10196.21157
mRNA.BJAM.scaffold10198.21158
mRNA.BJAM.scaffold10198.21159ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold10198.21160ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold102.773
mRNA.BJAM.scaffold102.774CULLIN
mRNA.BJAM.scaffold102.775CULLIN
mRNA.BJAM.scaffold102.776HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
mRNA.BJAM.scaffold102.777HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
mRNA.BJAM.scaffold102.778HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
mRNA.BJAM.scaffold102.779MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
mRNA.BJAM.scaffold102.780SHIPPO-1-RELATED
mRNA.BJAM.scaffold102.781GTP-BINDING PROTEIN ALPHA SUBUNIT
mRNA.BJAM.scaffold102.782
mRNA.BJAM.scaffold102.783
mRNA.BJAM.scaffold102.784U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14
mRNA.BJAM.scaffold102.785UBX-RELATED
mRNA.BJAM.scaffold102.786VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
mRNA.BJAM.scaffold1020.6205UNCHARACTERIZED
mRNA.BJAM.scaffold1020.6206
mRNA.BJAM.scaffold1020.6207SH3 DOMAIN-CONTAINING
mRNA.BJAM.scaffold1020.6208MEDIATOR COMPLEX SUBUNIT 28
mRNA.BJAM.scaffold1020.6209CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold1020.6210CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold10201.21161ABC1 FAMILY PROTEIN
mRNA.BJAM.scaffold10215.21162
mRNA.BJAM.scaffold10215.21163CBP/P300-RELATED
mRNA.BJAM.scaffold10215.21164
mRNA.BJAM.scaffold10215.21165
mRNA.BJAM.scaffold1022.6211NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED
mRNA.BJAM.scaffold1022.6212NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED
mRNA.BJAM.scaffold1022.6213TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172
mRNA.BJAM.scaffold1022.6214TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172
mRNA.BJAM.scaffold1022.6215U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4
mRNA.BJAM.scaffold1022.6216GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP
mRNA.BJAM.scaffold1022.6217-
mRNA.BJAM.scaffold1022.6218ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1
mRNA.BJAM.scaffold1022.6219CYCLINS
mRNA.BJAM.scaffold1022.6220RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED
mRNA.BJAM.scaffold1022.6221SULFITE REDUCTASE
mRNA.BJAM.scaffold10224.21166
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