About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1060.6357PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
mRNA.BJAM.scaffold1060.6358
mRNA.BJAM.scaffold1060.6359
mRNA.BJAM.scaffold1060.63604.1 G PROTEIN
mRNA.BJAM.scaffold1060.6361
mRNA.BJAM.scaffold10603.21352
mRNA.BJAM.scaffold10610.21353
mRNA.BJAM.scaffold10612.21354
mRNA.BJAM.scaffold10618.21355
mRNA.BJAM.scaffold10618.21356ADP RIBOSYLATION FACTOR-RELATED
mRNA.BJAM.scaffold1062.6362RE40534P-RELATED
mRNA.BJAM.scaffold1062.6363NUCLEOLAR COMPLEX 2 AND RAD4-RELATED
mRNA.BJAM.scaffold10624.21358DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold10626.21359
mRNA.BJAM.scaffold10629.21360BRISC AND BRCA1-A COMPLEX MEMBER 2
mRNA.BJAM.scaffold10630.21361
mRNA.BJAM.scaffold10631.21362
mRNA.BJAM.scaffold1064.6364CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold1064.6365
mRNA.BJAM.scaffold10641.21363
mRNA.BJAM.scaffold10643.21364
mRNA.BJAM.scaffold10647.21365
mRNA.BJAM.scaffold10647.21366PROTEIN STAR
mRNA.BJAM.scaffold1065.6366CBF1 INTERACTING COREPRESSOR CIR
mRNA.BJAM.scaffold1065.6367
mRNA.BJAM.scaffold1065.6368ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
mRNA.BJAM.scaffold1065.6369FI04035P
mRNA.BJAM.scaffold1065.6370CELL DIVISION CONTROL PROTEIN 6-RELATED
mRNA.BJAM.scaffold1065.6371CELL DIVISION CONTROL PROTEIN 6-RELATED
mRNA.BJAM.scaffold1065.6372IMPORTIN-7, 8, 11
mRNA.BJAM.scaffold1065.6373CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold10653.21367
mRNA.BJAM.scaffold10655.21368PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
mRNA.BJAM.scaffold10655.21369
mRNA.BJAM.scaffold1066.6374
mRNA.BJAM.scaffold1066.6375MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25
mRNA.BJAM.scaffold1066.6376
mRNA.BJAM.scaffold1066.6377
mRNA.BJAM.scaffold1066.6378
mRNA.BJAM.scaffold1066.6379
mRNA.BJAM.scaffold1066.6380
mRNA.BJAM.scaffold1066.6381
mRNA.BJAM.scaffold1066.6382NUCLEOTIDE KINASE
mRNA.BJAM.scaffold1066.6383FATTY ACID ACYL TRANSFERASE-RELATED
mRNA.BJAM.scaffold10660.21370
mRNA.BJAM.scaffold10661.21371HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3
mRNA.BJAM.scaffold10664.21372CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold10667.21373LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold1067.6386IODOTHYRONINE DEIODINASE
mRNA.BJAM.scaffold1067.6387
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