About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold10875.21487
mRNA.BJAM.scaffold10875.21488
mRNA.BJAM.scaffold10875.21489NUCLEOTIDE KINASE
mRNA.BJAM.scaffold10879.21490PRE-MRNA SPLICING FACTOR PRP31
mRNA.BJAM.scaffold1088.6465HERMANSKY-PUDLAK SYNDROME 3 PROTEIN
mRNA.BJAM.scaffold1088.6466HERMANSKY-PUDLAK SYNDROME 3 PROTEIN
mRNA.BJAM.scaffold1088.6467HERMANSKY-PUDLAK SYNDROME 3 PROTEIN
mRNA.BJAM.scaffold1088.6468PROTEIN GAMETE EXPRESSED 1
mRNA.BJAM.scaffold10882.21493ASPARTYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold10882.21494ASPARTYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold10884.21495LIM DOMAIN-CONTAINING PROTEIN JUB
mRNA.BJAM.scaffold10892.21496PROTEIN KINASE PKN/PRK1, EFFECTOR
mRNA.BJAM.scaffold10892.21497PROTEIN KINASE PKN/PRK1, EFFECTOR
mRNA.BJAM.scaffold10892.21498
mRNA.BJAM.scaffold10897.21499OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold10897.21500OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold109.841POS9-ACTIVATING FACTOR FAP7-RELATED
mRNA.BJAM.scaffold109.842PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold109.843
mRNA.BJAM.scaffold109.844
mRNA.BJAM.scaffold1090.6469MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.scaffold1090.6470
mRNA.BJAM.scaffold1090.6471
mRNA.BJAM.scaffold1090.6472APPLE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold10901.21501
mRNA.BJAM.scaffold10906.21502BAND 7 PROTEIN-RELATED
mRNA.BJAM.scaffold10906.21503BAND 7 PROTEIN-RELATED
mRNA.BJAM.scaffold10908.21504
mRNA.BJAM.scaffold10908.21505
mRNA.BJAM.scaffold10909.21506UNC-13-4A, ISOFORM B
mRNA.BJAM.scaffold1091.6473
mRNA.BJAM.scaffold10910.21507MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
mRNA.BJAM.scaffold10912.21509
mRNA.BJAM.scaffold10916.21510LONG-CHAIN-FATTY-ACID--COA LIGASE
mRNA.BJAM.scaffold1092.6474RAS LIKE FAMILY 10 MEMBER B-RELATED
mRNA.BJAM.scaffold1092.6475NUCLEAR PORE COMPLEX PROTEIN NUP155
mRNA.BJAM.scaffold1092.6476
mRNA.BJAM.scaffold1092.6477ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED
mRNA.BJAM.scaffold1092.6478
mRNA.BJAM.scaffold10920.21511FORKHEAD BOX PROTEIN
mRNA.BJAM.scaffold10921.21512
mRNA.BJAM.scaffold10921.21513TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED
mRNA.BJAM.scaffold10926.21514SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
mRNA.BJAM.scaffold10926.21515SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
mRNA.BJAM.scaffold10926.21516
mRNA.BJAM.scaffold10926.21517SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
mRNA.BJAM.scaffold1093.6479
mRNA.BJAM.scaffold1093.648040S RIBOSOMAL PROTEIN S8
mRNA.BJAM.scaffold1093.6481RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B
mRNA.BJAM.scaffold1093.6482PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2
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