About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS10451LEUCOKININ RECEPTOR-RELATED
HS10452SIDEROFLEXIN
HS10453RAB11-RELATED
HS10454HOMEOBOX PROTEIN EMX-RELATED
HS10455HOMEOBOX PROTEIN EMX-RELATED
HS10456M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25
HS10457AP-5 COMPLEX SUBUNIT SIGMA-1
HS10458REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS10459GDNF RECEPTOR ALPHA
HS10460LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
HS10461
HS10462EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
HS10463RIBOSE-5-PHOSPHATE ISOMERASE
HS10464ANION EXCHANGE PROTEIN
HS10465CYTOKINESIS PROTEIN 3
HS10466
HS10467RCG26366
HS10468GTPASE, IMAP FAMILY MEMBER-RELATED
HS10469KALLIKREIN-RELATED
HS10470FORKHEAD BOX PROTEIN
HS10471HRAS-LIKE SUPPRESSOR - RELATED
HS10472HRAS-LIKE SUPPRESSOR - RELATED
HS10473FIBROBLAST GROWTH FACTOR RECEPTOR
HS10474TYROSINE-PROTEIN KINASE RECEPTOR
HS10475REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS10476
HS10477REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS10478VISUAL SYSTEM HOMEOBOX 2
HS10479KELCH DOMAIN-CONTAINING PROTEIN
HS10480DNA POLYMERASE EPSILON SUBUNIT B
HS10481
HS10482
HS10483REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS10484CELL ADHESION MOLECULE
HS10485CELL ADHESION MOLECULE
HS10486CELL ADHESION MOLECULE
HS10487CELL ADHESION MOLECULE
HS10488LYSOPHOSPHATIDIC ACID RECEPTOR 5/SPHINGOSYLPHOSPHORYLCHOLINE RECEPTOR
HS10489ZINC FINGER PROTEIN 142
HS10490PR DOMAIN ZINC FINGER PROTEIN
HS10491
HS10492ZINC FINGER AND SCAN DOMAIN-CONTAINING
HS10493
HS10494ZINC FINGER PROTEIN
HS10495REVERSE TRANSCRIPTASES
HS10496REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS10497ZINC FINGER AND SCAN DOMAIN-CONTAINING
HS10498TRANSCRIPTIONAL REPRESSOR PROTEIN YY
HS10499TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
HS10500LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN
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