About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS10351
HS10352TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
HS10353
HS10354FERM DOMAIN (PROTEIN4.1-EZRIN-RADIXIN-MOESIN) FAMILY
HS10355DUMPY: SHORTER THAN WILD-TYPE
HS10356
HS10357E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
HS10358GLYCOGEN PHOSPHORYLASE
HS10359ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN
HS10360NINEIN
HS10361NINEIN
HS10362SALVADOR FAMILY WW DOMAIN-CONTAINING PROTEIN 1
HS10363GUANYLATE BINDING PROTEIN
HS10364STERILE20-LIKE KINASE, ISOFORM B-RELATED
HS10365
HS10366CELL DIVISION PROTEIN KINASE
HS10367
HS10368L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
HS10369GUANINE NUCLEOTIDE EXCHANGE FACTOR
HS10370RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 33
HS10371TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
HS10372CORNICHON-RELATED
HS10373GLIAL FACTOR NATURATION FACTOR
HS10374GALECTIN
HS10375DISCS LARGE
HS10376DESUMOYLATING ISOPEPTIDASE
HS10377RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
HS10378PHOSPHOFURIN ACIDIC CLUSTER SORTING PROTEIN
HS10379WD REPEAT DOMAIN-CONTAINING FAMILY
HS10380SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
HS10381MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25
HS10382SODIUM/CALCIUM EXCHANGER
HS10383SERINE-THREONINE PROTEIN KINASE
HS10384PEPTIDYLPROLYL ISOMERASE
HS10385MED-6-RELATED
HS10386PECANEX
HS10387EG:114D9.1 PROTEIN-RELATED
HS10388NEUROGENIC PROTEIN MASTERMIND
HS10389NUCLEOLAR AND SPINDLE-ASSOCIATED PROTEIN 1
HS10390COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30
HS10391UNCHARACTERIZED
HS10392GOLGIN-84
HS10393MYOSIN HEAVY CHAIN - RELATED
HS10394EGF-LIKE DOMAIN-CONTAINING PROTEIN
HS10395TANDEM C2 DOMAINS NUCLEAR PROTEIN
HS10396PLECKSTRIN
HS10397GALECTIN
HS10398ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN 26
HS10399
HS10400PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
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