About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02275-
Paelopatides02276-
Paelopatides02277PINSTRIPE, ISOFORM A
Paelopatides02278-
Paelopatides02279NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides02280REVERSE TRANSCRIPTASES
Paelopatides02281-
Paelopatides02282EXPRESSED PROTEIN
Paelopatides02283THAP DOMAIN-CONTAINING PROTEIN 6
Paelopatides02284-
Paelopatides02285PROTEIN CBG26694
Paelopatides02286ENDONUCLEASE-RELATED
Paelopatides02287-
Paelopatides02288PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides02289RETROTRANSPOSON
Paelopatides02290PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides02291ENZYMATIC POLYPROTEIN-RELATED
Paelopatides02292-
Paelopatides02293-
Paelopatides02294CYTOKINE RECEPTOR
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