About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02255PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides02256PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides02257SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B
Paelopatides02258EPM2A-INTERACTING PROTEIN 1
Paelopatides02259OS-9-RELATED
Paelopatides02260SI:CH211-196P9.1-RELATED
Paelopatides02261-
Paelopatides02262-
Paelopatides02263-
Paelopatides02264MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
Paelopatides02265NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides02266-
Paelopatides02267-
Paelopatides02268REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides02269PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides02270-
Paelopatides02271INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides02272-
Paelopatides02273TRANSPOSON
Paelopatides02274-
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