Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00004510 | |
| SKAU_T00004520 | |
| SKAU_T00004530 | TENASCIN |
| SKAU_T00004540 | LIM DOMAIN KINASE 1 |
| SKAU_T00004550 | NMDA RECEPTOR SYNAPTONUCLEAR SIGNALING AND NEURONAL MIGRATION FACTOR |
| SKAU_T00004560 | NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER |
| SKAU_T00004570 | MITOCHONDRIAL RIBOSOMAL PROTEIN L41 |
| SKAU_T00004580 | DIPHTHINE METHYLTRANSFERASE |
| SKAU_T00004590 | PROTEIN PAXX |
| SKAU_T00004600 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| SKAU_T00004610 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| SKAU_T00004620 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| SKAU_T00004630 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| SKAU_T00004640 | NEURAL PROLIFERATION DIFFERENTIATION AND CONTROL PROTEIN-1 NPDC-1 PROTEIN |
| SKAU_T00004650 | NIBAN FAMILY MEMBER |
| SKAU_T00004660 | VESICLE PROTEIN SORTING-ASSOCIATED |
| SKAU_T00004670 | AKNA DOMAIN-CONTAINING PROTEIN |
| SKAU_T00004680 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| SKAU_T00004690 | NEUTROPHIL CYTOSOLIC FACTOR 2, NEUTROPHIL NADPH OXIDASE FACTOR 2 |
| SKAU_T00004700 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 14 |
| SKAU_T00004710 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 14 |
| SKAU_T00004720 | |
| SKAU_T00004730 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 14 |
| SKAU_T00004740 | |
| SKAU_T00004750 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 14 |
| SKAU_T00004760 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
| SKAU_T00004770 | LD33804P |
| SKAU_T00004780 | MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED |
| SKAU_T00004790 | COLLAGEN ALPHA |
| SKAU_T00004800 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| SKAU_T00004810 | G9A, ISOFORM B |
| SKAU_T00004820 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| SKAU_T00004830 | |
| SKAU_T00004840 | NEGATIVE ELONGATION FACTOR COMPLEX MEMBER B |
| SKAU_T00004850 | JANUS-A/JANUS-B |
| SKAU_T00004860 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| SKAU_T00004870 | |
| SKAU_T00004880 | |
| SKAU_T00004890 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00004900 | IRON-SULFUR DOMAIN CONTAINING PROTEIN |
| SKAU_T00004910 | NEUROLIGIN |
| SKAU_T00004920 | HAMARTIN |
| SKAU_T00004930 | SPERM ACROSOME-ASSOCIATED PROTEIN 9 |
| SKAU_T00004940 | NUCLEOTIDE KINASE |
| SKAU_T00004950 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILY |
| SKAU_T00004960 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILY |
| SKAU_T00004970 | RNA HELICASE |
| SKAU_T00004980 | HOMEO BOX HB9 LIKE A-RELATED |
| SKAU_T00004990 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 77 |
| SKAU_T00005000 | TRANSCRIPTION TERMINATION FACTOR 1 |
