Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00001510 | |
| SKAU_T00001520 | |
| SKAU_T00001530 | SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG |
| SKAU_T00001540 | CORONIN |
| SKAU_T00001550 | |
| SKAU_T00001560 | P-SELECTIN GLYCOPROTEIN LIGAND-1 |
| SKAU_T00001570 | TRANSMEMBRANE PROTEIN 119 |
| SKAU_T00001580 | IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG |
| SKAU_T00001590 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| SKAU_T00001600 | FIDO DOMAIN-CONTAINING PROTEIN DDB_G0283145 |
| SKAU_T00001610 | CHROMOSOME 1, WHOLE GENOME SHOTGUN SEQUENCE |
| SKAU_T00001620 | |
| SKAU_T00001630 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| SKAU_T00001640 | LIM DOMAIN KINASE 1 |
| SKAU_T00001650 | ZINC FINGER PROTEIN |
| SKAU_T00001660 | SI:DKEY-29D5.2 |
| SKAU_T00001670 | |
| SKAU_T00001680 | TUBULIN |
| SKAU_T00001690 | PLASMINOGEN-RELATED |
| SKAU_T00001700 | THADA/DEATH RECEPTOR INTERACTING PROTEIN |
| SKAU_T00001710 | UBIQUITIN |
| SKAU_T00001720 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| SKAU_T00001730 | DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A |
| SKAU_T00001740 | P2X PURINOCEPTOR |
| SKAU_T00001750 | PESCADILLO - RELATED |
| SKAU_T00001760 | DUAL SPECIFICITY PROTEIN KINASE |
| SKAU_T00001770 | DUAL SPECIFICITY PROTEIN KINASE |
| SKAU_T00001780 | |
| SKAU_T00001790 | |
| SKAU_T00001800 | DUAL SPECIFICITY PROTEIN KINASE |
| SKAU_T00001810 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00001820 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00001830 | DUAL SPECIFICITY PROTEIN KINASE |
| SKAU_T00001840 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00001850 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |
| SKAU_T00001860 | CLAUDIN |
| SKAU_T00001870 | APOPTOSIS-INDUCING FACTOR 1 |
| SKAU_T00001880 | TRANSMEMBRANE GTPASE FZO1 |
| SKAU_T00001890 | SOLUTE CARRIER FAMILY 2 |
| SKAU_T00001900 | - |
| SKAU_T00001910 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00001920 | - |
| SKAU_T00001930 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
| SKAU_T00001940 | IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB |
| SKAU_T00001950 | |
| SKAU_T00001960 | LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN |
| SKAU_T00001970 | THIOREDOXIN-RELATED |
| SKAU_T00001980 | |
| SKAU_T00001990 | ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2 |
| SKAU_T00002000 |
