Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00001010 | OXYSTEROL-BINDING PROTEIN-RELATED |
| SKAU_T00001020 | RAS LIKE FAMILY 10 MEMBER B-RELATED |
| SKAU_T00001030 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| SKAU_T00001040 | STOP PROTEIN |
| SKAU_T00001050 | |
| SKAU_T00001060 | TRANSGELIN |
| SKAU_T00001070 | RNA BINDING PROTEIN |
| SKAU_T00001080 | RHOMBOID-RELATED PROTEIN |
| SKAU_T00001090 | COLLAGEN ALPHA |
| SKAU_T00001100 | TP53-REGULATED INHIBITOR OF APOPTOSIS 1 |
| SKAU_T00001110 | |
| SKAU_T00001120 | |
| SKAU_T00001130 | UNCHARACTERIZED |
| SKAU_T00001140 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| SKAU_T00001150 | TECTONIC FAMILY MEMBER |
| SKAU_T00001160 | |
| SKAU_T00001170 | VACUOLAR PROTON ATPASES |
| SKAU_T00001180 | |
| SKAU_T00001190 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| SKAU_T00001200 | |
| SKAU_T00001210 | |
| SKAU_T00001220 | |
| SKAU_T00001230 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| SKAU_T00001240 | |
| SKAU_T00001250 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| SKAU_T00001260 | G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP |
| SKAU_T00001270 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
| SKAU_T00001280 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
| SKAU_T00001290 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| SKAU_T00001300 | |
| SKAU_T00001310 | UNCHARACTERIZED |
| SKAU_T00001320 | |
| SKAU_T00001330 | |
| SKAU_T00001340 | |
| SKAU_T00001350 | MEVALONATE KINASE |
| SKAU_T00001360 | CORRINOID ADENOSYLTRANSFERASE |
| SKAU_T00001370 | ALDEHYDE DEHYDROGENASE |
| SKAU_T00001380 | UBIQUITIN-PROTEIN LIGASE E3C |
| SKAU_T00001390 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
| SKAU_T00001400 | MYOSIN |
| SKAU_T00001410 | MYOSIN |
| SKAU_T00001420 | |
| SKAU_T00001430 | FORKHEAD BOX PROTEIN N1 |
| SKAU_T00001440 | ACETYL-COA CARBOXYLASE, ISOFORM A |
| SKAU_T00001450 | URACIL-DNA GLYCOSYLASE |
| SKAU_T00001460 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 |
| SKAU_T00001470 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00001480 | SYNAPTIC VESICLE GLYCOPROTEIN 2 |
| SKAU_T00001490 | D-AMINO ACID OXIDASE |
| SKAU_T00001500 |
