Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00002510 | RHO FAMILY GTPASE |
| SKAU_T00002520 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 |
| SKAU_T00002530 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 |
| SKAU_T00002540 | 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE |
| SKAU_T00002550 | INTEGRAL MEMBRANE PROTEIN DGCR2/IDD |
| SKAU_T00002560 | CELL ADHESION MOLECULE |
| SKAU_T00002570 | |
| SKAU_T00002580 | |
| SKAU_T00002590 | |
| SKAU_T00002600 | |
| SKAU_T00002610 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| SKAU_T00002620 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED |
| SKAU_T00002630 | COILED-COIL DOMAIN-CONTAINING PROTEIN 157 |
| SKAU_T00002640 | INNER MEMBRANE TRANSPORTER YGJI-RELATED |
| SKAU_T00002650 | DIGEORGE SYNDROME CRITICAL REGION 6 DGCR6 FAMILY MEMBER |
| SKAU_T00002660 | DIGEORGE SYNDROME CRITICAL REGION 6 DGCR6 FAMILY MEMBER |
| SKAU_T00002670 | C2 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00002680 | RAS GTPASE-ACTIVATING PROTEINS |
| SKAU_T00002690 | |
| SKAU_T00002700 | PAXILLIN-RELATED |
| SKAU_T00002710 | |
| SKAU_T00002720 | 60S ACIDIC RIBOSOMAL PROTEIN P0 |
| SKAU_T00002730 | TRANSLATIONAL ACTIVATOR GCN1-RELATED |
| SKAU_T00002740 | RAS-RELATED PROTEIN RAB |
| SKAU_T00002750 | |
| SKAU_T00002760 | BICD FAMILY-LIKE CARGO ADAPTER |
| SKAU_T00002770 | |
| SKAU_T00002780 | |
| SKAU_T00002790 | BICD FAMILY-LIKE CARGO ADAPTER |
| SKAU_T00002800 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| SKAU_T00002810 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| SKAU_T00002820 | MYOTUBULARIN-RELATED |
| SKAU_T00002830 | |
| SKAU_T00002840 | CCAAT DISPLACEMENT PROTEIN-RELATED |
| SKAU_T00002850 | |
| SKAU_T00002860 | |
| SKAU_T00002870 | MYOSIN REGULATORY LIGHT CHAIN 2 |
| SKAU_T00002880 | SERINE/THREONINE-PROTEIN KINASE PIM |
| SKAU_T00002890 | SERINE/THREONINE PROTEIN PHOSPHATASE |
| SKAU_T00002900 | |
| SKAU_T00002910 | F20B24.22 |
| SKAU_T00002920 | F20B24.22 |
| SKAU_T00002930 | PROTEIN PHOSPHATASE 2C |
| SKAU_T00002940 | DNA REPAIR PROTEIN RAD9 |
| SKAU_T00002950 | FAMILY WITH SEQUENCE SIMILARITY 216 MEMBER A |
| SKAU_T00002960 | ARP2/3 COMPLEX 21 KD SUBUNIT |
| SKAU_T00002970 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00002980 | CELL DIVISION CYCLE 16,23,27 |
| SKAU_T00002990 | CALCIUM-TRANSPORTING ATPASE |
| SKAU_T00003000 | INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG |
