Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00005510 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| SKAU_T00005520 | |
| SKAU_T00005530 | CENTROSOME-ASSOCIATED PROTEIN 350 |
| SKAU_T00005540 | CENTROSOME-ASSOCIATED PROTEIN 350 |
| SKAU_T00005550 | QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE |
| SKAU_T00005560 | LIM/HOMEOBOX PROTEIN LHX |
| SKAU_T00005570 | |
| SKAU_T00005580 | |
| SKAU_T00005590 | AGAP004733-PA |
| SKAU_T00005600 | XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED |
| SKAU_T00005610 | PROTEIN FAM78A |
| SKAU_T00005620 | SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE |
| SKAU_T00005630 | B-BOX DOMAIN CONTAINING |
| SKAU_T00005640 | ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 |
| SKAU_T00005650 | PROTEIN VAV |
| SKAU_T00005660 | |
| SKAU_T00005670 | FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS |
| SKAU_T00005680 | TRANSCRIPTION INITIATION FACTOR TFIID |
| SKAU_T00005690 | |
| SKAU_T00005700 | NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A |
| SKAU_T00005710 | |
| SKAU_T00005720 | |
| SKAU_T00005730 | COLLAGEN ALPHA |
| SKAU_T00005740 | |
| SKAU_T00005750 | OLFACTOMEDIN-RELATED |
| SKAU_T00005760 | OLFACTOMEDIN-RELATED |
| SKAU_T00005770 | PIERCE HOMOLOG |
| SKAU_T00005780 | 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
| SKAU_T00005790 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| SKAU_T00005800 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| SKAU_T00005810 | - |
| SKAU_T00005820 | TRANSCRIPTION FACTOR-LIKE 5 PROTEIN |
| SKAU_T00005830 | |
| SKAU_T00005840 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| SKAU_T00005850 | TNF RECEPTOR ASSOCIATED FACTOR |
| SKAU_T00005860 | |
| SKAU_T00005870 | |
| SKAU_T00005880 | ATP-DEPENDENT RNA HELICASE |
| SKAU_T00005890 | ATP-DEPENDENT RNA HELICASE |
| SKAU_T00005900 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 |
| SKAU_T00005910 | SRR1-LIKE PROTEIN |
| SKAU_T00005920 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
| SKAU_T00005930 | VACUOLAR ATP SYNTHASE SUBUNIT G |
| SKAU_T00005940 | - |
| SKAU_T00005950 | SJOEGREN SYNDROME NUCLEAR AUTOANTIGEN 1 |
| SKAU_T00005960 | TON-B BOX DOMAIN |
| SKAU_T00005970 | UNCHARACTERIZED |
| SKAU_T00005980 | |
| SKAU_T00005990 | T-BOX PROTEIN-RELATED |
| SKAU_T00006000 | - |
